102d
;SEQUENCE-DEPENDENT DRUG BINDING TO THE MINOR GROOVE OF DNA: THE CRYSTAL STRUCTURE OF THE DNA DODECAMER D(CGCAAATTTGCG)2 COMPLEXED WITH PROPAMIDINE ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 102d |
| deposition_date | 1994-12-15 |
| title | ;SEQUENCE-DEPENDENT DRUG BINDING TO THE MINOR GROOVE OF DNA: THE CRYSTAL STRUCTURE OF THE DNA DODECAMER D(CGCAAATTTGCG)2 COMPLEXED WITH PROPAMIDINE ; |
| keywords | B-DNA, DOUBLE HELIX, COMPLEXED WITH DRUG, DNA; DNA |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 13.66 Å |
| rg_electron | 13.09 Å |
| i0 | 2827800.00 |
| molecular_weight | 7623.0 kDa |
| excluded_volume | 7520 ų |
| envelope_volume | 9850 ų |
| shell_volume | 7227 ų |
| envelope_diameter | 46.4 Å |
| shell_rg | 17.09 Å |
| envelope_rg | 13.38 Å |
| shape_rg | 12.98 Å |
| total_rg | 13.85 Å |
| total_atoms | 509 |
| n_residues | 24 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 46.8 Å |
| rg_real | 13.74 Å |
| rg_real_error | 0.33 Å |
| i0_real | 2.8280e+06 |
| i0_real_error | 2.9660e+04 |
| rg_reciprocal | 13.74 Å |
| i0_reciprocal | 2828000.0000 |
| total_estimate | 0.8593 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 14.2 Å |
| skewness | 0.466 |
| kurtosis | -0.288 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 212100.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.792; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.812; Smooth: 0.977 |