1a3m
PAROMOMYCIN BINDING INDUCES A LOCAL CONFORMATIONAL CHANGE IN THE A SITE OF 16S RRNA, NMR, 20 STRUCTURES
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1a3m |
| deposition_date | 1998-01-22 |
| title | PAROMOMYCIN BINDING INDUCES A LOCAL CONFORMATIONAL CHANGE IN THE A SITE OF 16S RRNA, NMR, 20 STRUCTURES |
| keywords | RIBOSOMAL RNA COMPLEX, DECODING REGION, RNA-LIGAND INTERACTION, RNA; RNA |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 13.98 Å |
| rg_electron | 14.01 Å |
| i0 | 1317260000.00 |
| molecular_weight | 174570.0 kDa |
| excluded_volume | 162890 ų |
| envelope_volume | 16275 ų |
| shell_volume | 10200 ų |
| envelope_diameter | 49.3 Å |
| shell_rg | 19.07 Å |
| envelope_rg | 14.70 Å |
| shape_rg | 13.87 Å |
| total_rg | 14.27 Å |
| total_atoms | 17340 |
| n_residues | 540 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 42.9 Å |
| rg_real | 14.03 Å |
| rg_real_error | 0.25 Å |
| i0_real | 1.3170e+09 |
| i0_real_error | 1.4530e+07 |
| rg_reciprocal | 14.03 Å |
| i0_reciprocal | 1317000000.0000 |
| total_estimate | 0.8919 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 15.8 Å |
| skewness | 0.400 |
| kurtosis | -0.329 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 141500.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.879; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.984; Smooth: 0.971 |