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1a6z

HFE (HUMAN) HEMOCHROMATOSIS PROTEIN

Method: X-RAY DIFFRACTION D_max: 131.8 Å Quality: GOOD

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1a6z
deposition_date	1998-03-04
title	HFE (HUMAN) HEMOCHROMATOSIS PROTEIN
keywords	HFE, HEREDITARY HEMOCHROMATOSIS, MHC CLASS I, MHC CLASS I COMPLEX; MHC CLASS I COMPLEX
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	35.64 Å
rg_electron	36.11 Å
i0	118878000.00
molecular_weight	86000.0 kDa
excluded_volume	106770 Å³
envelope_volume	141440 Å³
shell_volume	36080 Å³
envelope_diameter	137.6 Å
shell_rg	37.87 Å
envelope_rg	36.14 Å
shape_rg	36.03 Å
total_rg	36.47 Å
total_atoms	6076
n_residues	742
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	131.8 Å
rg_real	36.12 Å
rg_real_error	1.57 Å
i0_real	1.1890e+08
i0_real_error	2.3360e+06
rg_reciprocal	35.82 Å
i0_reciprocal	118800000.0000
total_estimate	0.7820
solution_quality	GOOD a GOOD solution
n_peaks	2
r_peak_primary	32.9 Å
skewness	0.678
kurtosis	0.010
angular_range	— – 0.2200 Å⁻¹
current_alpha	0.0000
highest_alpha	12630000.0000
n_real_points	45
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.562; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.559; Smooth: 0.918

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4. Crystallography & Experiment

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5. Entities & Polymer Info (3)

Entity 1 polymer

description	HFE
formula_weight	32339.4 kDa
src_method	man
entity_count	2

Polymer

type	polypeptide(L)
strand_id	A,C
atom_count	6099

RLLRSHSLHYLFMGASEQDLGLSLFEALGYVDDQLFVFYDHESRRVEPRTPWVSSRISSQMWLQLSQSLKGWDHMFTVDFWTIMENHNHSKESHTLQVILGCEMQEDNSTEGYWKYGYDGQDHLEFCPDTLDWRAAEPRAWPTKLEWERHKIRARQNRAYLERDCPAQLQQLLELGRGVLDQQVPPLVKVTHHVTSSVTTLRCRALNYYPQNITMKWLKDKQPMDAKEFEPKDVLPNGDGTYQGWITLAVPPGEEQRYTCQVEHPGLDQPLIVIW

Source

organism	Homo sapiens
common_name	human
ncbi_taxonomy_id	9606
host_organism	Cricetulus griseus

Entity 2 polymer

description	BETA-2-MICROGLOBULIN
formula_weight	11748.2 kDa
src_method	nat
entity_count	2

Polymer

type	polypeptide(L)
strand_id	B,D

IQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM

Entity 3 water

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	23

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6. Citations (1)

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length_a	68.800 Å
length_b	100.100 Å
length_c	147.600 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	8

space_group	P 21 21 21
int_tables_number	19
crystal_system	—

resolution	2.600 Å
resolution_low	15.000 Å
r_factor	0.2330
r_work	0.2330
r_free	0.2770

fit	/app/data/saxs_computation/a6/1a6z/1a6z.fit
pddf	/app/data/pr_computation/a6/1a6z/1a6z.pr.out
profile	/app/data/saxs_computation/a6/1a6z/1a6z.dat

HFE (HUMAN) HEMOCHROMATOSIS PROTEIN

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction

5. Entities & Polymer Info (3)

Entity 1 polymer

Polymer

Source

Entity 2 polymer

Polymer

Entity 3 water

6. Citations (1)

7. Files & Curves (10)

Files (7)

Curves (3)