1a84
;NMR SOLUTION STRUCTURE OF A DNA DODECAMER DUPLEX CONTAINING A CIS-DIAMMINEPLATINUM(II) D(GPG) INTRASTRAND CROSS-LINK, THE MAJOR ADDUCT OF THE ANTICANCER DRUG CISPLATIN, 1 STRUCTURE ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1a84 |
| deposition_date | 1998-04-02 |
| title | ;NMR SOLUTION STRUCTURE OF A DNA DODECAMER DUPLEX CONTAINING A CIS-DIAMMINEPLATINUM(II) D(GPG) INTRASTRAND CROSS-LINK, THE MAJOR ADDUCT OF THE ANTICANCER DRUG CISPLATIN, 1 STRUCTURE ; |
| keywords | DEOXYRIBONUCLEIC ACID, CISPLATIN, DNA, DUPLEX, DODECAMER, HMG-DOMAIN INTERACTION; DNA |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 13.91 Å |
| rg_electron | 13.43 Å |
| i0 | 3008170.00 |
| molecular_weight | 7542.0 kDa |
| excluded_volume | 7146 ų |
| envelope_volume | 10314 ų |
| shell_volume | 7094 ų |
| envelope_diameter | 44.7 Å |
| shell_rg | 17.84 Å |
| envelope_rg | 13.38 Å |
| shape_rg | 13.41 Å |
| total_rg | 14.09 Å |
| total_atoms | 767 |
| n_residues | 24 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 46.4 Å |
| rg_real | 13.91 Å |
| rg_real_error | 0.33 Å |
| i0_real | 3.0080e+06 |
| i0_real_error | 3.1860e+04 |
| rg_reciprocal | 13.92 Å |
| i0_reciprocal | 3008000.0000 |
| total_estimate | 0.8979 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 1 |
| r_peak_primary | 45.2 Å |
| skewness | 0.270 |
| kurtosis | -0.424 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 129800.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.919; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.930; Smooth: 0.982 |