1ap1
;THE SOLUTION NMR STRUCTURE OF AN S-STYRENE OXIDE ADDUCT AT THE N2 POSITION OF GUANINE OF AN 11 BASE-PAIR OLIGONUCLEOTIDE SEQUENCE CODING FOR AMINO ACIDS 11-13 OF THE PRODUCT OF THE N-RAS PROTOONCOGENE, MINIMIZED AVERAGE STRUCTURE ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1ap1 |
| deposition_date | 1997-07-22 |
| title | ;THE SOLUTION NMR STRUCTURE OF AN S-STYRENE OXIDE ADDUCT AT THE N2 POSITION OF GUANINE OF AN 11 BASE-PAIR OLIGONUCLEOTIDE SEQUENCE CODING FOR AMINO ACIDS 11-13 OF THE PRODUCT OF THE N-RAS PROTOONCOGENE, MINIMIZED AVERAGE STRUCTURE ; |
| keywords | DNA DUPLEX, HUMAN N-RAS GENE, CODON 12 SEQUENCE, S-STYRENE OXIDE, MINOR GROOVE ADDUCT, DEOXYRIBONUCLEIC ACID, DNA; DNA |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 12.73 Å |
| rg_electron | 12.15 Å |
| i0 | 2394780.00 |
| molecular_weight | 6814.0 kDa |
| excluded_volume | 6645 ų |
| envelope_volume | 8728 ų |
| shell_volume | 6824 ų |
| envelope_diameter | 41.7 Å |
| shell_rg | 16.28 Å |
| envelope_rg | 12.32 Å |
| shape_rg | 12.03 Å |
| total_rg | 13.00 Å |
| total_atoms | 711 |
| n_residues | 21 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 42.7 Å |
| rg_real | 12.76 Å |
| rg_real_error | 0.31 Å |
| i0_real | 2.3950e+06 |
| i0_real_error | 2.7310e+04 |
| rg_reciprocal | 12.76 Å |
| i0_reciprocal | 2395000.0000 |
| total_estimate | 0.8677 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 14.6 Å |
| skewness | 0.369 |
| kurtosis | -0.324 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 135800.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.781; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.955; Smooth: 0.979 |