1axl
;SOLUTION CONFORMATION OF THE (-)-TRANS-ANTI-[BP]DG ADDUCT OPPOSITE A DELETION SITE IN DNA DUPLEX D(CCATC-[BP]G-CTACC)D(GGTAG--GATGG), NMR, 6 STRUCTURES ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1axl |
| deposition_date | 1997-10-16 |
| title | ;SOLUTION CONFORMATION OF THE (-)-TRANS-ANTI-[BP]DG ADDUCT OPPOSITE A DELETION SITE IN DNA DUPLEX D(CCATC-[BP]G-CTACC)D(GGTAG--GATGG), NMR, 6 STRUCTURES ; |
| keywords | DEOXYRIBONUCLEIC ACID, DNA, BENZO[A]PYRENE, CARCINOGEN; DNA |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 12.08 Å |
| rg_electron | 11.76 Å |
| i0 | 62266000.00 |
| molecular_weight | 40240.0 kDa |
| excluded_volume | 39835 ų |
| envelope_volume | 13215 ų |
| shell_volume | 9210 ų |
| envelope_diameter | 42.2 Å |
| shell_rg | 17.79 Å |
| envelope_rg | 12.98 Å |
| shape_rg | 11.61 Å |
| total_rg | 12.25 Å |
| total_atoms | 4200 |
| n_residues | 126 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 41.1 Å |
| rg_real | 12.08 Å |
| rg_real_error | 0.31 Å |
| i0_real | 6.2270e+07 |
| i0_real_error | 6.1730e+05 |
| rg_reciprocal | 12.08 Å |
| i0_reciprocal | 62270000.0000 |
| total_estimate | 0.8860 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 14.0 Å |
| skewness | 0.296 |
| kurtosis | -0.422 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 97440.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.870; Stabil: 0.999; Sysdev: 1.000; Positv: 1.000; Valcen: 0.923; Smooth: 0.984 |