1b3p
5'-D(*GP*GP*AP*GP*GP*AP*T)-3'
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1b3p |
| deposition_date | 1998-12-14 |
| title | 5'-D(*GP*GP*AP*GP*GP*AP*T)-3' |
| keywords | (G-G-A) TRIPLET REPEAT; V-SHAPED BACKBONE; PARALLEL-STRANDED SEGMENTS; MISMATCH ALIGNMENTS; UNIFORM 13C, 15N-LABELED DNA, DNA; DNA |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 8.78 Å |
| rg_electron | 8.93 Å |
| i0 | 177861000.00 |
| molecular_weight | 65716.0 kDa |
| excluded_volume | 62737 ų |
| envelope_volume | 5949 ų |
| shell_volume | 5861 ų |
| envelope_diameter | 34.7 Å |
| shell_rg | 14.16 Å |
| envelope_rg | 9.86 Å |
| shape_rg | 8.77 Å |
| total_rg | 9.27 Å |
| total_atoms | 6810 |
| n_residues | 210 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 30.1 Å |
| rg_real | 8.77 Å |
| rg_real_error | 0.28 Å |
| i0_real | 1.7790e+08 |
| i0_real_error | 1.8730e+06 |
| rg_reciprocal | 8.77 Å |
| i0_reciprocal | 177900000.0000 |
| total_estimate | 0.8480 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 10.7 Å |
| skewness | 0.410 |
| kurtosis | 0.069 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 56560.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.753; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.976; Smooth: 0.786 |