STRUCTURAL BASIS FOR SELECTIVITY OF A SMALL MOLECULE, S1-BINDING, SUB-MICROMOLAR INHIBITOR OF UROKINASE TYPE PLASMINOGEN ACTIVATOR

entry_id	1c5q
deposition_date	1999-12-22
title	STRUCTURAL BASIS FOR SELECTIVITY OF A SMALL MOLECULE, S1-BINDING, SUB-MICROMOLAR INHIBITOR OF UROKINASE TYPE PLASMINOGEN ACTIVATOR
keywords	selective, S1 site inhibitor, structure-based drug design, urokinase, trypsin, thrombin, HYDROLASE; HYDROLASE
method	X-RAY DIFFRACTION

rg_guinier	17.22 Å
rg_electron	16.14 Å
i0	10948300.00
molecular_weight	23690.0 kDa
excluded_volume	29161 ų
envelope_volume	32252 ų
shell_volume	16522 ų
envelope_diameter	52.5 Å
shell_rg	22.40 Å
envelope_rg	16.34 Å
shape_rg	16.13 Å
total_rg	17.12 Å
total_atoms	3243
n_residues	223
n_harmonics	20
q_range	— – 0.5000 Å−1
n_points	101
shell_type	directional
solvent_density	0.3340 e/ų
contrast_shell	0.0300 e/ų
crysol_version	4.1.3

dmax	55.8 Å
rg_real	17.10 Å
rg_real_error	0.30 Å
i0_real	1.0950e+07
i0_real_error	1.2020e+05
rg_reciprocal	17.11 Å
i0_reciprocal	10950000.0000
total_estimate	0.8084
solution_quality	GOOD a GOOD solution
n_peaks	2
r_peak_primary	22.0 Å
skewness	0.113
kurtosis	-0.459
angular_range	— – 0.4600 Å−1
current_alpha	0.0000
highest_alpha	2651000.0000
n_real_points	77
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.836; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.997; Smooth: 0.000

Unit Cell

length_a	63.870 Å
length_b	64.110 Å
length_c	69.490 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	4

Symmetry

space_group	P 21 21 21
int_tables_number	19
crystal_system	—

Refinement

resolution	1.430 Å
resolution_low	7.500 Å
r_factor	0.1970
r_work	0.1970
r_free	0.2210

Diffraction

temperature

298.0 K

Files (7)

• pr_distribution /app/data/pr_computation/c5/1c5q/pr_distribution.json
• pr_output /app/data/pr_computation/c5/1c5q/1c5q.pr.out
• pr_plot /app/data/visualization/pr_computation/c5/1c5q/1c5q_pr_distribution.png
• saxs_curve_dat /app/data/saxs_computation/c5/1c5q/1c5q.dat
• saxs_fit /app/data/saxs_computation/c5/1c5q/1c5q.fit
• saxs_log /app/data/saxs_computation/c5/1c5q/1c5q.log
• saxs_plot /app/data/visualization/saxs_computation/c5/1c5q/1c5q_saxs_profile.png

Curves (3)

fit	/app/data/saxs_computation/c5/1c5q/1c5q.fit
pddf	/app/data/pr_computation/c5/1c5q/1c5q.pr.out
profile	/app/data/saxs_computation/c5/1c5q/1c5q.dat