STRUCTURAL BASIS FOR THE SPECIFICITY OF UBIQUITIN C-TERMINAL HYDROLASES

entry_id	1cmx
deposition_date	1999-05-12
title	STRUCTURAL BASIS FOR THE SPECIFICITY OF UBIQUITIN C-TERMINAL HYDROLASES
keywords	UBIQUITIN HYDROLASE, UBIQUITIN, DEUBIQUITINATING ENZYME, CYSTEINE PROTEASE, ENZYME SPECIFICITY, HYDROLASE; HYDROLASE
method	X-RAY DIFFRACTION

rg_guinier	26.87 Å
rg_electron	25.78 Å
i0	53234400.00
molecular_weight	57591.0 kDa
excluded_volume	72448 ų
envelope_volume	87488 ų
shell_volume	28798 ų
envelope_diameter	87.5 Å
shell_rg	32.65 Å
envelope_rg	25.98 Å
shape_rg	25.77 Å
total_rg	26.55 Å
total_atoms	4067
n_residues	515
n_harmonics	20
q_range	— – 0.5000 Å−1
n_points	101
shell_type	directional
solvent_density	0.3340 e/ų
contrast_shell	0.0300 e/ų
crysol_version	4.1.3

dmax	88.0 Å
rg_real	26.90 Å
rg_real_error	0.47 Å
i0_real	5.3230e+07
i0_real_error	7.0660e+05
rg_reciprocal	26.89 Å
i0_reciprocal	53230000.0000
total_estimate	0.7012
solution_quality	REASONABLE a REASONABLE solution
n_peaks	1
r_peak_primary	86.5 Å
skewness	0.370
kurtosis	-0.436
angular_range	— – 0.2950 Å−1
current_alpha	0.0001
highest_alpha	18930000.0000
n_real_points	60
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.870; Stabil: 1.000; Sysdev: 0.199; Positv: 1.000; Valcen: 0.951; Smooth: 0.952

Unit Cell

length_a	199.300 Å
length_b	199.300 Å
length_c	36.800 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	120.00 °
z_pdb	18

Symmetry

space_group	H 3
int_tables_number	146
crystal_system	—

Refinement

resolution	2.250 Å
resolution_low	30.000 Å
r_factor	—
r_work	0.2480
r_free	0.2850

Diffraction

temperature

100.0 K

Files (7)

• pr_distribution /app/data/pr_computation/cm/1cmx/pr_distribution.json
• pr_output /app/data/pr_computation/cm/1cmx/1cmx.pr.out
• pr_plot /app/data/visualization/pr_computation/cm/1cmx/1cmx_pr_distribution.png
• saxs_curve_dat /app/data/saxs_computation/cm/1cmx/1cmx.dat
• saxs_fit /app/data/saxs_computation/cm/1cmx/1cmx.fit
• saxs_log /app/data/saxs_computation/cm/1cmx/1cmx.log
• saxs_plot /app/data/visualization/saxs_computation/cm/1cmx/1cmx_saxs_profile.png

Curves (3)

fit	/app/data/saxs_computation/cm/1cmx/1cmx.fit
pddf	/app/data/pr_computation/cm/1cmx/1cmx.pr.out
profile	/app/data/saxs_computation/cm/1cmx/1cmx.dat