1d33
Formaldehyde cross-links daunorubicin and DNA efficiently: HPLC and X-RAY diffraction studies
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1d33 |
| deposition_date | 1991-02-27 |
| title | Formaldehyde cross-links daunorubicin and DNA efficiently: HPLC and X-RAY diffraction studies |
| keywords | RIGHT HANDED DNA, DOUBLE HELIX, COMPLEXED WITH DRUG, MODIFIED, DNA; DNA |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 9.54 Å |
| rg_electron | 8.75 Å |
| i0 | 289806.00 |
| molecular_weight | 2363.0 kDa |
| excluded_volume | 2471 ų |
| envelope_volume | 3024 ų |
| shell_volume | 3596 ų |
| envelope_diameter | 29.8 Å |
| shell_rg | 12.39 Å |
| envelope_rg | 9.09 Å |
| shape_rg | 8.66 Å |
| total_rg | 9.89 Å |
| total_atoms | 160 |
| n_residues | 5 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 32.9 Å |
| rg_real | 9.62 Å |
| rg_real_error | 0.29 Å |
| i0_real | 2.8980e+05 |
| i0_real_error | 2.9090e+03 |
| rg_reciprocal | 9.61 Å |
| i0_reciprocal | 289800.0000 |
| total_estimate | 0.8508 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 9.2 Å |
| skewness | 0.468 |
| kurtosis | -0.359 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 11230.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.829; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.644; Smooth: 0.924 |