1d70
;SOLUTION STRUCTURE OF A DNA OCTAMER CONTAINING THE PRIBNOW BOX VIA RESTRAINED MOLECULAR DYNAMICS SIMULATION WITH DISTANCE AND TORSION ANGLE CONSTRAINTS DERIVED FROM TWO-DIMENSIONAL NUCLEAR MAGNETIC RESONANCE SPECTRAL FITTING ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1d70 |
| deposition_date | 1992-04-15 |
| title | ;SOLUTION STRUCTURE OF A DNA OCTAMER CONTAINING THE PRIBNOW BOX VIA RESTRAINED MOLECULAR DYNAMICS SIMULATION WITH DISTANCE AND TORSION ANGLE CONSTRAINTS DERIVED FROM TWO-DIMENSIONAL NUCLEAR MAGNETIC RESONANCE SPECTRAL FITTING ; |
| keywords | DNA; DNA |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 10.30 Å |
| rg_electron | 9.89 Å |
| i0 | 15334500.00 |
| molecular_weight | 19317.0 kDa |
| excluded_volume | 19033 ų |
| envelope_volume | 7941 ų |
| shell_volume | 6850 ų |
| envelope_diameter | 33.6 Å |
| shell_rg | 15.30 Å |
| envelope_rg | 10.71 Å |
| shape_rg | 9.70 Å |
| total_rg | 10.56 Å |
| total_atoms | 1288 |
| n_residues | 64 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 33.5 Å |
| rg_real | 10.25 Å |
| rg_real_error | 0.29 Å |
| i0_real | 1.5330e+07 |
| i0_real_error | 1.6150e+05 |
| rg_reciprocal | 10.25 Å |
| i0_reciprocal | 15330000.0000 |
| total_estimate | 0.8959 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 11.9 Å |
| skewness | 0.121 |
| kurtosis | -0.469 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 38220.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.899; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.997; Smooth: 0.950 |