1d80
CRYSTAL STRUCTURE OF AN OLIGONUCLEOTIDE DUPLEX CONTAINING G.G BASE-PAIRS: THE INFLUENCE OF MISPAIRING ON DNA BACKBONE CONFORMATION
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1d80 |
| deposition_date | 1992-06-17 |
| title | CRYSTAL STRUCTURE OF AN OLIGONUCLEOTIDE DUPLEX CONTAINING G.G BASE-PAIRS: THE INFLUENCE OF MISPAIRING ON DNA BACKBONE CONFORMATION |
| keywords | B-DNA, DOUBLE HELIX, MISMATCHED, DNA; DNA |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 13.63 Å |
| rg_electron | 13.23 Å |
| i0 | 2867140.00 |
| molecular_weight | 7393.0 kDa |
| excluded_volume | 7113 ų |
| envelope_volume | 9744 ų |
| shell_volume | 7148 ų |
| envelope_diameter | 46.6 Å |
| shell_rg | 16.99 Å |
| envelope_rg | 13.33 Å |
| shape_rg | 13.12 Å |
| total_rg | 13.93 Å |
| total_atoms | 492 |
| n_residues | 24 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 46.7 Å |
| rg_real | 13.71 Å |
| rg_real_error | 0.33 Å |
| i0_real | 2.8670e+06 |
| i0_real_error | 3.2170e+04 |
| rg_reciprocal | 13.71 Å |
| i0_reciprocal | 2867000.0000 |
| total_estimate | 0.8553 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 14.2 Å |
| skewness | 0.459 |
| kurtosis | -0.303 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 217100.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.793; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.808; Smooth: 0.927 |