SOLUTION STRUCTURE OF THE NUMB PTB DOMAIN COMPLEXED TO A NAK PEPTIDE

Method: SOLUTION NMR D_max: 50.9 Å Quality: GOOD

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1ddm
deposition_date	1999-11-11
title	SOLUTION STRUCTURE OF THE NUMB PTB DOMAIN COMPLEXED TO A NAK PEPTIDE
keywords	COMPLEX, SIGNAL TRANSDUCTION, PHOSPHOTYROSINE BINDING DOMAIN (PTB), ASYMMETRIC CELL DIVISION, SIGNALING PROTEIN-TRANSFERASE COMPLEX; SIGNALING PROTEIN/TRANSFERASE
method	SOLUTION NMR

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	15.33 Å
rg_electron	14.86 Å
i0	1728050000.00
molecular_weight	330240.0 kDa
excluded_volume	403920 Å³
envelope_volume	38045 Å³
shell_volume	18266 Å³
envelope_diameter	57.8 Å
shell_rg	23.65 Å
envelope_rg	17.50 Å
shape_rg	14.87 Å
total_rg	14.97 Å
total_atoms	45360
n_residues	2920
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	50.9 Å
rg_real	15.22 Å
rg_real_error	0.29 Å
i0_real	1.7280e+09
i0_real_error	2.1130e+07
rg_reciprocal	15.23 Å
i0_reciprocal	1728000000.0000
total_estimate	0.8717
solution_quality	GOOD a GOOD solution
n_peaks	2
r_peak_primary	20.6 Å
skewness	0.144
kurtosis	-0.291
angular_range	— – 0.5000 Å⁻¹
current_alpha	0.0000
highest_alpha	967000.0000
n_real_points	80
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.787; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 1.000; Smooth: 0.968

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4. Crystallography & Experiment

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5. Entities & Polymer Info (2)

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6. Citations (2)

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length_a	1.000 Å
length_b	1.000 Å
length_c	1.000 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	1

space_group	P 1
int_tables_number	1
crystal_system	—

description	NUMB PROTEIN
formula_weight	15277.4 kDa
src_method	man
entity_count	1

type	polypeptide(L)
strand_id	A
atom_count	45360

organism	Drosophila melanogaster
common_name	fruit fly
ncbi_taxonomy_id	7227
host_organism	Escherichia coli

SOLUTION STRUCTURE OF THE NUMB PTB DOMAIN COMPLEXED TO A NAK PEPTIDE

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

5. Entities & Polymer Info (2)

Entity 1 polymer

Polymer

Source

Entity 2 polymer

Polymer

6. Citations (2)

7. Files & Curves (10)

Files (7)

Curves (3)

description	NUMB ASSOCIATE KINASE
formula_weight	1277.4 kDa
ec_number	2.7.1.37
src_method	nat
entity_count	1

fit	/app/data/saxs_computation/dd/1ddm/1ddm.fit
pddf	/app/data/pr_computation/dd/1ddm/1ddm.pr.out
profile	/app/data/saxs_computation/dd/1ddm/1ddm.dat