X-ray crystal structure of ECP (RNase 3) at 1.75 A

entry_id	1dyt
deposition_date	2000-02-08
title	X-ray crystal structure of ECP (RNase 3) at 1.75 A
keywords	HYDROLASE, EOSINOPHIL CATIONIC PROTEIN, ECP, RNASE 3; HYDROLASE
method	X-RAY DIFFRACTION

rg_guinier	23.71 Å
rg_electron	23.05 Å
i0	20477800.00
molecular_weight	32056.0 kDa
excluded_volume	39101 ų
envelope_volume	49076 ų
shell_volume	18623 ų
envelope_diameter	77.7 Å
shell_rg	28.71 Å
envelope_rg	22.84 Å
shape_rg	23.03 Å
total_rg	23.79 Å
total_atoms	2242
n_residues	266
n_harmonics	20
q_range	— – 0.5000 Å−1
n_points	101
shell_type	directional
solvent_density	0.3340 e/ų
contrast_shell	0.0300 e/ų
crysol_version	4.1.3

dmax	77.6 Å
rg_real	23.78 Å
rg_real_error	0.51 Å
i0_real	2.0480e+07
i0_real_error	2.6330e+05
rg_reciprocal	23.76 Å
i0_reciprocal	20480000.0000
total_estimate	0.8955
solution_quality	GOOD a GOOD solution
n_peaks	2
r_peak_primary	25.5 Å
skewness	0.340
kurtosis	-0.531
angular_range	— – 0.3350 Å−1
current_alpha	0.0000
highest_alpha	2163000.0000
n_real_points	65
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.926; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.886; Smooth: 0.973

Unit Cell

length_a	62.163 Å
length_b	62.163 Å
length_c	174.590 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	16

Symmetry

space_group	P 43 2 2
int_tables_number	95
crystal_system	—

Refinement

resolution	1.750 Å
resolution_low	20.000 Å
r_factor	0.2240
r_work	0.2240
r_free	0.2710

Diffraction

temperature

100.0 K

Files (7)

• pr_distribution /app/data/pr_computation/dy/1dyt/pr_distribution.json
• pr_output /app/data/pr_computation/dy/1dyt/1dyt.pr.out
• pr_plot /app/data/visualization/pr_computation/dy/1dyt/1dyt_pr_distribution.png
• saxs_curve_dat /app/data/saxs_computation/dy/1dyt/1dyt.dat
• saxs_fit /app/data/saxs_computation/dy/1dyt/1dyt.fit
• saxs_log /app/data/saxs_computation/dy/1dyt/1dyt.log
• saxs_plot /app/data/visualization/saxs_computation/dy/1dyt/1dyt_saxs_profile.png

Curves (3)

fit	/app/data/saxs_computation/dy/1dyt/1dyt.fit
pddf	/app/data/pr_computation/dy/1dyt/1dyt.pr.out
profile	/app/data/saxs_computation/dy/1dyt/1dyt.dat