Crystal structure of an Rnase A dimer displaying a new type of 3D domain swapping

entry_id	1f0v
deposition_date	2000-05-17
title	Crystal structure of an Rnase A dimer displaying a new type of 3D domain swapping
keywords	domain swapping, crystal, ribonuclease, bovine pancreas, hydrolase-DNA COMPLEX; hydrolase/DNA
method	X-RAY DIFFRACTION

rg_guinier	35.31 Å
rg_electron	34.60 Å
i0	70624200.00
molecular_weight	59593.0 kDa
excluded_volume	71565 ų
envelope_volume	108300 ų
shell_volume	26221 ų
envelope_diameter	97.7 Å
shell_rg	41.62 Å
envelope_rg	32.37 Å
shape_rg	34.59 Å
total_rg	35.14 Å
total_atoms	4120
n_residues	504
n_harmonics	20
q_range	— – 0.5000 Å−1
n_points	101
shell_type	directional
solvent_density	0.3340 e/ų
contrast_shell	0.0300 e/ų
crysol_version	4.1.3

dmax	92.7 Å
rg_real	35.12 Å
rg_real_error	0.73 Å
i0_real	7.0620e+07
i0_real_error	1.1010e+06
rg_reciprocal	35.24 Å
i0_reciprocal	70630000.0000
total_estimate	0.7801
solution_quality	GOOD a GOOD solution
n_peaks	3
r_peak_primary	57.7 Å
skewness	-0.214
kurtosis	-0.939
angular_range	— – 0.2250 Å−1
current_alpha	0.0000
highest_alpha	2189000.0000
n_real_points	46
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.766; Stabil: 0.999; Sysdev: 1.000; Positv: 1.000; Valcen: 0.819; Smooth: 0.023

Unit Cell

length_a	83.569 Å
length_b	96.341 Å
length_c	48.240 Å
angle_alpha	90.00 °
angle_beta	107.50 °
angle_gamma	90.00 °
z_pdb	8

Symmetry

space_group	P 1 21 1
int_tables_number	4
crystal_system	—

Refinement

resolution	1.700 Å
resolution_low	10.000 Å
r_factor	—
r_work	0.1840
r_free	0.2130

Diffraction

temperature

100.0 K

Files (7)

• pr_distribution /app/data/pr_computation/f0/1f0v/pr_distribution.json
• pr_output /app/data/pr_computation/f0/1f0v/1f0v.pr.out
• pr_plot /app/data/visualization/pr_computation/f0/1f0v/1f0v_pr_distribution.png
• saxs_curve_dat /app/data/saxs_computation/f0/1f0v/1f0v.dat
• saxs_fit /app/data/saxs_computation/f0/1f0v/1f0v.fit
• saxs_log /app/data/saxs_computation/f0/1f0v/1f0v.log
• saxs_plot /app/data/visualization/saxs_computation/f0/1f0v/1f0v_saxs_profile.png

Curves (3)

fit	/app/data/saxs_computation/f0/1f0v/1f0v.fit
pddf	/app/data/pr_computation/f0/1f0v/1f0v.pr.out
profile	/app/data/saxs_computation/f0/1f0v/1f0v.dat