F124 FAB FRAGMENT FROM A MONOCLONAL ANTI-PRES2 ANTIBODY

Method: X-RAY DIFFRACTION D_max: 141.3 Å Quality: REASONABLE

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1f11
deposition_date	2000-05-18
title	F124 FAB FRAGMENT FROM A MONOCLONAL ANTI-PRES2 ANTIBODY
keywords	immunoglobulin, antibody, fab, hepatitis B, preS2, IMMUNE SYSTEM; IMMUNE SYSTEM
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	40.70 Å
rg_electron	41.38 Å
i0	139948000.00
molecular_weight	93790.0 kDa
excluded_volume	116430 Å³
envelope_volume	158530 Å³
shell_volume	36207 Å³
envelope_diameter	148.8 Å
shell_rg	39.83 Å
envelope_rg	41.69 Å
shape_rg	41.33 Å
total_rg	41.44 Å
total_atoms	6598
n_residues	868
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	141.3 Å
rg_real	41.33 Å
rg_real_error	1.80 Å
i0_real	1.3990e+08
i0_real_error	2.7760e+06
rg_reciprocal	40.71 Å
i0_reciprocal	139900000.0000
total_estimate	0.7031
solution_quality	REASONABLE a REASONABLE solution
n_peaks	2
r_peak_primary	32.6 Å
skewness	0.693
kurtosis	-0.221
angular_range	— – 0.1950 Å⁻¹
current_alpha	0.0000
highest_alpha	10880000.0000
n_real_points	40
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.530; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.338; Smooth: 0.210

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4. Crystallography & Experiment

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5. Entities & Polymer Info (2)

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6. Citations (2)

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length_a	135.700 Å
length_b	54.000 Å
length_c	120.000 Å
angle_alpha	90.00 °
angle_beta	101.00 °
angle_gamma	90.00 °
z_pdb	8

space_group	C 1 2 1
int_tables_number	5
crystal_system	—

resolution	3.000 Å
resolution_low	30.000 Å
r_factor	0.1910
r_work	0.1840
r_free	0.2710

description	F124 IMMUNOGLOBULIN (KAPPA LIGHT CHAIN)
formula_weight	23985.3 kDa
src_method	nat
entity_count	2

type	polypeptide(L)
strand_id	A,C
atom_count	6598

F124 FAB FRAGMENT FROM A MONOCLONAL ANTI-PRES2 ANTIBODY

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction

5. Entities & Polymer Info (2)

Entity 1 polymer

Polymer

Entity 2 polymer

Polymer

6. Citations (2)

7. Files & Curves (10)

Files (7)

Curves (3)

description	F124 IMMUNOGLOBULIN (IGG1 HEAVY CHAIN)
formula_weight	23594.4 kDa
src_method	nat
entity_count	2

fit	/app/data/saxs_computation/f1/1f11/1f11.fit
pddf	/app/data/pr_computation/f1/1f11/1f11.pr.out
profile	/app/data/saxs_computation/f1/1f11/1f11.dat