8e9g

Mycobacterial respiratory complex I with both quinone positions modelled

Method: ELECTRON MICROSCOPY D_max: 231.1 Å Quality: GOOD

SAXS 散射曲线 SAXS Profile

P(r) 距离分布 P(r) Distribution

下载 Download SAXS (.dat) P(r) (.pr.out) CIF

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1. 结构基本信息 1. Structure Basics

条目编号 entry_id	8e9g
沉积日期 deposition_date	2022-08-26
结构标题 title	Mycobacterial respiratory complex I with both quinone positions modelled
关键词 keywords	Complex, Oxidative Phosphorylation, NADH-quinone oxidoreductase, MEMBRANE PROTEIN; MEMBRANE PROTEIN
实验方法 method	ELECTRON MICROSCOPY

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2. SAXS 参数 (CRYSOL 理论计算) 2. SAXS Parameters (CRYSOL)

回转半径 Rg (Guinier) rg_guinier	74.53 Å
回转半径 Rg (电子) rg_electron	75.26 Å
零角强度 I(0) i0	3324290000.00
分子量 molecular_weight	510260.0 kDa
排除体积 excluded_volume	647250 Å³
包络体积 envelope_volume	884090 Å³
水化壳体积 shell_volume	105280 Å³
包络直径 envelope_diameter	273.4 Å
壳层 Rg shell_rg	63.71 Å
包络 Rg envelope_rg	75.77 Å
形状 Rg shape_rg	75.40 Å
总 Rg total_rg	74.52 Å
总原子数 total_atoms	35883
残基数 n_residues	5051
球谐函数阶数 n_harmonics	20
q 范围 q_range	— – 0.5000 Å⁻¹
数据点数 n_points	101
壳层类型 shell_type	directional
溶剂电子密度 solvent_density	0.3340 e/Å³
壳层衬度 contrast_shell	0.0300 e/Å³
CRYSOL 版本 crysol_version	4.1.3

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3. P(r) 距离分布 (GNOM 反演) 3. P(r) Analysis (GNOM)

最大尺寸 Dmax dmax	231.1 Å
Rg (实空间) rg_real	74.17 Å
Rg 误差 (实空间) rg_real_error	1.84 Å
I(0) (实空间) i0_real	3.3040e+09
I(0) 误差 (实空间) i0_real_error	7.2520e+07
Rg (倒空间) rg_reciprocal	71.36 Å
I(0) (倒空间) i0_reciprocal	3298000000.0000
解质量估计 total_estimate	0.7837
解质量评级 solution_quality	GOOD a GOOD solution
P(r) 峰数 n_peaks	1
主峰位置 r_peak_primary	55.0 Å
偏度 Skewness skewness	0.531
峰度 Kurtosis kurtosis	-0.567
角度范围 angular_range	— – 0.1050 Å⁻¹
当前正则化参数 α current_alpha	0.0602
最高正则化参数 α highest_alpha	93590000.0000
实空间数据点数 n_real_points	22
GNOM 版本 gnom_version	4.1.3
质量判据 quality_criteria	AN1: 0.000; Oscil: 0.735; Stabil: 0.996; Sysdev: 1.000; Positv: 1.000; Valcen: 0.879; Smooth: 0.092

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4. 晶体学与实验 4. Crystallography & Experiment

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5. 实体与聚合体信息 (22)

Entity 1 polymer

描述 description	Two-component system response regulator
分子量 formula_weight	14119.2 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	O
原子数 atom_count	35941

MAGSAPLRILVYSDNPRTREQVRLALGKRIHPELPEIEYVDVATAPMAISQMDAGGFDLAILDGEATPAGGMGVAKQVKDEIDDCPPILVLTGRADDAWLAKWSRAEAAVPHPIDPIRLSDAVVSLLRAPAQ

Entity 2 polymer

描述 description	NADH-quinone oxidoreductase subunit B
分子量 formula_weight	20123.7 kDa
EC 编号 ec_number	7.1.1.-
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	B

MGLEERLPGGILLSTVETVAGYVRKGSLWPATFGLACCAIEMMSTAGPRFDIARFGMERFSATPRQADLMIVAGRVSQKMAPVLRQIYDQMVEPKWVLAMGVCASSGGMFNNYAVVQGVDHVVPVDIYLPGCPPRPEMLLHAILKLHDKIQQMPLGVNREEAIREAEQAALAVPPTIELKGLLR

Entity 3 polymer

描述 description	NADH-quinone oxidoreductase subunit A
分子量 formula_weight	13628.3 kDa
EC 编号 ec_number	7.1.1.-
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	A

MALYTPILILGAIAAVFAVVSVGIALVIGPRRFNRSKLEAYECGIDPLPPVAAGLTGQRIPIRYYLIAMLFIVFDIEIVFLYPWAVAFDSLGLFAVIEMLLFMLTVFVAYAYVWRRGGLNWD

Entity 4 polymer

描述 description	NADH-quinone oxidoreductase subunit C
分子量 formula_weight	26610.7 kDa
EC 编号 ec_number	7.1.1.-
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	C

MSTSNGSANGTNGVGLPRGDEPEIIAVRRGMFGNRDTGDTSGYGRLVRPVALPGSTPRPYGGYFDAVMDRLAEVLGEERYAMSIERVVVYRDQLTIEVSRVQLPAVASVLRDDPDLRFELCLGVSGVHYPEDTGRELHAVYPLMSITHNRRIQLEVAAPDADPHIPSLYAVYPTTDWHERETYDFFGIIFDGHPSLTRIEMPDDWEGHPQRKDYPLGGIPVEYHGAQIPPPDQRRSYS

Entity 5 polymer

描述 description	NADH-quinone oxidoreductase subunit D
分子量 formula_weight	48556.8 kDa
EC 编号 ec_number	7.1.1.-
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	D

MSTSTVPPDGGEKVVVVGGNDWHEVVAAARAGAAAQAGERIVVNMGPQHPSTHGVLRLILEIEGEIITEARCGIGYLHTGIEKNLEYRNWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDDIPERASVIRVMLMELNRISSHLVALATGGMELGAMSAMFYGFREREEILRVFESITGLRMNHAYIRPGGLAADLPDDAITQVRRLVEILPKRLKDLEDLLNENYIWKARTVGVGYLDLTGCMALGITGPILRSTGLPHDLRKAQPYCGYENYEFDVITDDRCDSYGRYIIRVKEMHESVKIVEQCLARLKPGPVMISDKKLAWPADLKLGPDGLGNSPEHIAKIMGRSMEGLIHHFKLVTEGIRVPPGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAATCEGGMVADAIAAVASIDPVMGGVDR

Entity 6 polymer

描述 description	NADH-quinone oxidoreductase subunit E
分子量 formula_weight	25746.7 kDa
EC 编号 ec_number	1.6.99.5
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	E

MSEVFLELGQRPDEAGPPISGPATYPDDVTESLRADAEQIIARYPDARSALLPLLHLVQAQDGYLTPAGIGFCAAQLGLTEAEVTAVATFYSMYRRTPTGDYLVGVCTNTLCAIMGGDAILEALEDHLGVHPGQTTPDGRVTLEHVECNAACDYAPVVMVNWEFYDNQTPSSARDLVDGLRSGSPPPPTRGSLCTFRETARTLAGLTDPNAPGGAPGAATLAGLRLARERGMTAPTPPQTNGSAS

Entity 7 polymer

描述 description	NADH-quinone oxidoreductase subunit G
分子量 formula_weight	83894.8 kDa
EC 编号 ec_number	7.1.1.-
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	G

MTLAEPTKDTPPVEMVSLTIDDHEISVPKGTLLIRAAELMGIQIPRFCDHPLLDPVGACRQCLVEVEGQRKPMASCTTTVMPDMVVRTQFTSEAADKAQRGVMELLLINHPLDCPICDKGGECPLQNQAMSNGRPETRFEDVKRTFPKPISISSQVLLDRERCVLCARCTRFSSQIAGDPFIDLMERGALQQVGIGQDKPFQSYFSGNTVQICPVGALTGTAYRFRARPFDLVSSPSVCEHCASGCAQRTDHRRGKVLRRLAGDEPEVNEEWNCDKGRWAFTYATVGDRITTPMLRDGGVLRPASWSEALTVAAAGLLTAAGSTGVLVGGRCTVEDAYAYAKFARMVLNTNDVDFRARPHSAEEAEFLAAHVAGQTMGLRYAELENAPTVLLAGFEPEEESPIVFLRLRKGVRKNGVQVVAVAPWASRGLTKLAGTVVPTVPGDEPAALDGMHDDDRLRRPGAVILVGERLATSPGALSAAVRLAAATGARLAWIPRRAGERGAIEAGALPNLLPGGRPVDDADARAEVARAWYISALPEAPGRDTAAILSTAASGHLAALLVGGVELGDLPDPELAVAAVRTTPFVVSLELRESAVTELADVVFPVAPVVEKAGSFLNWEGRPRPFAPSLKTNAIPDLRVLHYLADEIGVDLALPTAEAADAELAQLGTWGGARPPAPTAPPTARPEAGSGQAVLASWRMLLDAGRLQDGEPHLAGTAVRPVARMSAATAAGIGASDGAPVTVSTERGAVTLPLAVTDMPDGVVWLPMNSPGSAVHQRLGVTAGAVVSIGAGA

Entity 8 polymer

描述 description	NADH-quinone oxidoreductase subunit F
分子量 formula_weight	47831.1 kDa
EC 编号 ec_number	7.1.1.-
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	F

MTPLTPVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGFPTGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGAIIAAYAIRARHAFIYVRGEVLPVLRRLQAAVAEAYAAGYLGTDIMGSGFDLDLIVHAGAGAYICGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFRSMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTPLLTAEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREGTYWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVAHLDGGCPFDPHASTLMATEGAGV

Entity 9 polymer

描述 description	NADH-quinone oxidoreductase subunit I
分子量 formula_weight	19860.5 kDa
EC 编号 ec_number	7.1.1.-
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	I

MPKFLDALAGFAVTLGSMFKKPITEGYPEKPGPVAPRYHGRHQLNRYPDGLEKCIGCELCAWACPADAIYVEGADNTADERYSPGERYGRVYQINYLRCIGCGLCIEACPTRALTMTTEYEMADDNRADLIWGKDKLLAPLQEGMQAPPHDMAPGKTDDDYYLGNVTPITPVPSGTEDAR

Entity 10 polymer

描述 description	NADH-quinone oxidoreductase subunit H
分子量 formula_weight	44477.3 kDa
EC 编号 ec_number	7.1.1.-
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	H

MTHPDPTLFGHDPWWLMLAKAVAIFVFLLLTVLSAILIERKLLGRMQMRFGPNRVGPAGLLQSLADGIKLALKEGLVPAGVDKPIYLLAPVISVIPAFVAFSVIPLGGAVSVFGHRTPLQLTDLPVAVLFILAATSIGVYGIVLAGWASGSTYPLLGGLRSSAQVVSYEIAMGLSFVAVFLYAGTMSTSGIVAAQDRTWFVFLLLPSFLVYVVSMVGETNRAPFDLPEAEGELVGGFHTEYSSLKFAMFMLAEYVNMTTVSALATTMFLGGWHAPFPFNLIDGANSGWWPLLWFTAKVWTFMFLYFWLRATLPRLRYDQFMALGWKVLIPVSLLWIMVVAITRSLRQHGEGTWAAWLLTAAVVVVVALIWGLATSLRRRTVQPPPPQSTGAYPVPPLPSVGTKETADA

Entity 11 polymer

描述 description	NADH-quinone oxidoreductase subunit J
分子量 formula_weight	26398.8 kDa
EC 编号 ec_number	7.1.1.-
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	J

MNSDLMLLAAEGARTSTSEAVVFWVVGTVALVGAIGVVAARKAVYSAVFLACTMISLAVLYIAQDAPFLGVVQIVVYTGAVMMLFLFVLMLIGVDLTESLVETIKGHRIAALIAGAGFGILVIAGIGNVSVAGFSGLAAANSGGNVEGLAALIFTRYLWAFELTSALLITAALGAMVLAHRERFERRKTQRELAIERFQTGGHPTPLPNPGVYARHNSVDVPARLPDGSESPLSVSTILPHRTVGSATNGKR

Entity 12 polymer

描述 description	NADH-quinone oxidoreductase subunit K
分子量 formula_weight	10876.9 kDa
EC 编号 ec_number	7.1.1.-
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	K

MNPDNYLYLSALLFTIGAAGVLLRRNAIVMFMCVELMLNAANLAFVNFSRMHGQLDGQVVAFFTMVVAACEVVVGLAIIMAIFRTRRSASVDDANLLKH

Entity 13 polymer

描述 description	NADH-quinone oxidoreductase, L subunit
分子量 formula_weight	65446.6 kDa
EC 编号 ec_number	1.6.99.5
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	L

MITDWLPVWLLIALPAAGATILLLAGRRSDRWGHLLGCAMSLAAFAVGTVLFAGMLGRSGEERAVHEALFSWVPVGGLQVDFGLQLDQLSVCFVLLITGVGSLIHIYSIGYMAEDPDRRRFFAYLNLFLAAMLLLVLADNYLGLYAGWEGVGLASYLLIGFWSHKPSAATAAKKAFVVNRVGDMGLAIALMIMFATIGSISFAGVFAAAPGLSEATLSAIGLLLLLGACGKSAQVPLQSWLGDAMEGPTPVSALIHAATMVTAGVYLIVRSGPIFDLAPTAQTGVVIVGAVTLLFGAIIGCAKDDIKKALAASTMSQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGAGSVMHAMNDEVNMRRYGGLRKVLPVTFATFGLGYLAIIGVPPLAGFFSKDGIIEAALGAGGARGVILGGAAILGAGITAFYMTRVMLMTFFGEKRWAANSHPHEAPAVMTWPMILLAVGSVVSGGALAIGGTLSHWLEPVVGTHEAHHAVPVWVVTAIVLAVVAVGIAVAYRMYARQAVPEEVPEGSALTVAARRDLYGDAFNEAVFMRGGQTLTAAMVTVDDKAVDGTAGGLAALVSRTSDALRQVQTGFARSYALSMLGGSALVVAAILAVQLW

Entity 14 polymer

描述 description	NADH-quinone oxidoreductase subunit N
分子量 formula_weight	54013.3 kDa
EC 编号 ec_number	7.1.1.-
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	N

MITPSIEYGLLSPMLIVFGVAIAGVLIEALAPRQSRYPLQVTLALGGLIATVVAVVFVARGLSGTPGRPAVLGAVVLDAPAVFLQGTIALVGILGIMLIAERQKATVSAGEARGLEDFTPQASAVAGSVAEQLATKTGVMQTEVFPLTMFAIGGMLLFPAADDLLTMFVALEVLSLPLYLLCGLARRRRLLSQEAALKYFLLGAFSSAFFIYGAAMLYGSAGTLDLSGIAESVAAGSGNTSLALLGVALLLVGVLFKVGAVPFHSWIPDVYQGAPTSITAFMAAATKIAAFGAMLRIFYVAVPALRDDWRPVLWAIAILTMVVGTVTAVTQTDVKRMLAYSAVAHSGFILTGVIAANPAGVSSTLFYLFAYGFSTLGAFAVVGLIRNAAGDEETSMAQWAGLGRRYPIVGVVFSLFLLAFAGIPLTSGFVSKFAVFKAAGEGGAIPLVIIGVIASAVAAYFYVRVIVLMFFTEPPDDAPELVVPSGLSTAVVTVTAAVTFALGALPQPLLDLANSAETFLH

Entity 15 polymer

描述 description	NADH-quinone oxidoreductase, M subunit
分子量 formula_weight	56338.3 kDa
EC 编号 ec_number	1.6.99.5
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	M

MVSTFPWLTVLWAVPVVGAAVVILLPAAQQVLAKWLALAVSVLTLAVTAVVAIGFDPAAAQYQFVESHRWIPSFGTGYILGVDGIALALVVLTAVLVPLLIIAGWNDASRQTGLAGRSVQAYLALTLAVEGMVLMSLVALDILLFYVFFEAMLIPMYFLIGGFGGENRSRAAVKFLLYNLFGGLIMLAAVIGLYVVTAGSDAFAAGTFDFREIVAAVSSGEFAVNPAIMNFLFLGFMFAFAVKAPLWPFHRWLPDAAVEATPASAVLMMAVMDKVGTFGMLRYCLQLFPDASTYFRPVVITLAAIGIVYGAVLAIGQTDVMRLIAYTSISHFGFIILGIFVMTSQGQSGSTLYMINHGISTAALFLIAGFLVSRRGSRLIDSYGGVQKVAPVLAGTFLVAGLATLSLPGLAPFISEFLVLIGTFTRYPVVAVFAATALVLSAVYILWTYQRMMTGPVRDGIGDGDRPVRDLVPRELVVVAPLLALLLVLGIYPKPALDVINPAVEHTLTTIGQTDPEPTVPPTIAEGAR

Entity 16 non-polymer

描述 description	IRON/SULFUR CLUSTER
分子量 formula_weight	351.6 kDa
来源方法 src_method	syn
拷贝数 entity_count	7

Entity 17 non-polymer

描述 description	MENAQUINONE-9
分子量 formula_weight	785.2 kDa
来源方法 src_method	syn
拷贝数 entity_count	2

Entity 18 non-polymer

描述 description	FE2/S2 (INORGANIC) CLUSTER
分子量 formula_weight	175.8 kDa
来源方法 src_method	syn
拷贝数 entity_count	2

Entity 19 non-polymer

描述 description	GUANOSINE-5'-TRIPHOSPHATE
分子量 formula_weight	523.2 kDa
来源方法 src_method	syn
拷贝数 entity_count	1

Entity 20 non-polymer

描述 description	ZINC ION
分子量 formula_weight	65.4 kDa
来源方法 src_method	syn
拷贝数 entity_count	1

Entity 21 non-polymer

描述 description	FLAVIN MONONUCLEOTIDE
分子量 formula_weight	456.3 kDa
来源方法 src_method	syn
拷贝数 entity_count	1

Entity 22 non-polymer

描述 description	;(2R)-3-{[(R)-hydroxy({(1S,2R,3R,4R,5S,6S)-3,4,5-trihydroxy-2-(alpha-D-mannopyranosyloxy)-6-[(6-O-undecanoyl-beta-D-mannopyranosyl)oxy]cyclohexyl}oxy)phosphoryl]oxy}-2-(octanoyloxy)propyl undecanoate ;
分子量 formula_weight	1121.2 kDa
来源方法 src_method	syn
拷贝数 entity_count	1

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6. 折叠分类 (SCOP + CATH) 12 domains

CATH v4.4 (12 domains)

结构域编号 domain_id	8e9gA01
类 Class class	1 — Mainly Alpha
架构 Architecture architecture	20 — Up-down Bundle
拓扑 Topology topology	58 — Methane Monooxygenase Hydroxylase; Chain G, domain 1
同源超家族 H-superfamily homologous superfamily	1610 — NADH:ubiquinone/plastoquinone oxidoreductase, chain 3

结构域编号 domain_id	8e9gB01
类 Class class	3 — Alpha Beta
架构 Architecture architecture	40 — 3-Layer(aba) Sandwich
拓扑 Topology topology	50 — Rossmann fold
同源超家族 H-superfamily homologous superfamily	12280 —

结构域编号 domain_id	8e9gD01
类 Class class	1 — Mainly Alpha
架构 Architecture architecture	10 — Orthogonal Bundle
拓扑 Topology topology	645 — Cytochrome-c3 Hydrogenase; chain B
同源超家族 H-superfamily homologous superfamily	10 — Cytochrome-c3 Hydrogenase, chain B

结构域编号 domain_id	8e9gE01
类 Class class	1 — Mainly Alpha
架构 Architecture architecture	10 — Orthogonal Bundle
拓扑 Topology topology	10 — Arc Repressor Mutant, subunit A
同源超家族 H-superfamily homologous superfamily	1590 — NADH-quinone oxidoreductase subunit E

结构域编号 domain_id	8e9gE02
类 Class class	3 — Alpha Beta
架构 Architecture architecture	40 — 3-Layer(aba) Sandwich
拓扑 Topology topology	30 — Glutaredoxin
同源超家族 H-superfamily homologous superfamily	10 — Glutaredoxin

结构域编号 domain_id	8e9gF01
类 Class class	3 — Alpha Beta
架构 Architecture architecture	40 — 3-Layer(aba) Sandwich
拓扑 Topology topology	50 — Rossmann fold
同源超家族 H-superfamily homologous superfamily	11540 — NADH-ubiquinone oxidoreductase 51kDa subunit

结构域编号 domain_id	8e9gF02
类 Class class	3 — Alpha Beta
架构 Architecture architecture	10 — Roll
拓扑 Topology topology	20 — Ubiquitin-like (UB roll)
同源超家族 H-superfamily homologous superfamily	600 —

结构域编号 domain_id	8e9gF03
类 Class class	1 — Mainly Alpha
架构 Architecture architecture	20 — Up-down Bundle
拓扑 Topology topology	1440 — de novo design (two linked rop proteins)
同源超家族 H-superfamily homologous superfamily	230 — NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain

结构域编号 domain_id	8e9gG01
类 Class class	2 — Mainly Beta
架构 Architecture architecture	40 — Beta Barrel
拓扑 Topology topology	40 — Barwin-like endoglucanases
同源超家族 H-superfamily homologous superfamily	20 —

结构域编号 domain_id	8e9gI01
类 Class class	3 — Alpha Beta
架构 Architecture architecture	30 — 2-Layer Sandwich
拓扑 Topology topology	70 — Alpha-Beta Plaits
同源超家族 H-superfamily homologous superfamily	3270 —

结构域编号 domain_id	8e9gJ01
类 Class class	1 — Mainly Alpha
架构 Architecture architecture	20 — Up-down Bundle
拓扑 Topology topology	120 — Four Helix Bundle (Hemerythrin (Met), subunit A)
同源超家族 H-superfamily homologous superfamily	1200 — NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ

结构域编号 domain_id	8e9gK01
类 Class class	1 — Mainly Alpha
架构 Architecture architecture	10 — Orthogonal Bundle
拓扑 Topology topology	287 — Helix Hairpins
同源超家族 H-superfamily homologous superfamily	3510 —

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7. 引用文献 (2)

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晶胞边长 a length_a	1.000 Å
晶胞边长 b length_b	1.000 Å
晶胞边长 c length_c	1.000 Å
晶胞夹角 α angle_alpha	90.00 °
晶胞夹角 β angle_beta	90.00 °
晶胞夹角 γ angle_gamma	90.00 °
晶胞分子数 Z z_pdb	—

空间群 space_group	P 1
空间群编号 int_tables_number	1
晶系 crystal_system	—

分辨率 resolution	2.60 Å
分辨率测定方法 resolution_method	—
颗粒数 num_particles	61177

fit	/app/data/saxs_computation/e9/8e9g/8e9g.fit
pddf	/app/data/pr_computation/e9/8e9g/8e9g.pr.out
profile	/app/data/saxs_computation/e9/8e9g/8e9g.dat

Mycobacterial respiratory complex I with both quinone positions modelled

SAXS 散射曲线 SAXS Profile

P(r) 距离分布 P(r) Distribution

1. 结构基本信息 1. Structure Basics

2. SAXS 参数 (CRYSOL 理论计算) 2. SAXS Parameters (CRYSOL)

3. P(r) 距离分布 (GNOM 反演) 3. P(r) Analysis (GNOM)

4. 晶体学与实验 4. Crystallography & Experiment

晶胞参数 Unit Cell

对称性 Symmetry

冷冻电镜 EM 3D

5. 实体与聚合体信息 (22)

Entity 1 polymer

聚合体 Polymer

Entity 2 polymer

聚合体 Polymer

Entity 3 polymer

聚合体 Polymer

Entity 4 polymer

聚合体 Polymer

Entity 5 polymer

聚合体 Polymer

Entity 6 polymer

聚合体 Polymer

Entity 7 polymer

聚合体 Polymer

Entity 8 polymer

聚合体 Polymer

Entity 9 polymer

聚合体 Polymer

Entity 10 polymer

聚合体 Polymer

Entity 11 polymer

聚合体 Polymer

Entity 12 polymer

聚合体 Polymer

Entity 13 polymer

聚合体 Polymer

Entity 14 polymer

聚合体 Polymer

Entity 15 polymer

聚合体 Polymer

Entity 16 non-polymer

Entity 17 non-polymer

Entity 18 non-polymer

Entity 19 non-polymer

Entity 20 non-polymer

Entity 21 non-polymer

Entity 22 non-polymer

6. 折叠分类 (SCOP + CATH) 12 domains

CATH v4.4 (12 domains)

7. 引用文献 (2)

8. 文件与曲线 (10)

Files (7)

Curves (3)