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8tl7

CryoEM Structure of a Computationally Designed T3 Tetrahedral Nanocage

Method: ELECTRON MICROSCOPY Dmax: 227.1 Å Quality: GOOD

SAXS 散射曲线 SAXS Profile

SAXS profile for 8tl7

P(r) 距离分布 P(r) Distribution

P(r) distribution for 8tl7
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1. 结构基本信息 1. Structure Basics

条目编号 entry_id8tl7
沉积日期 deposition_date2023-07-26
结构标题 titleCryoEM Structure of a Computationally Designed T3 Tetrahedral Nanocage
关键词 keywords;expandable nanomaterial, de novo, t3 tetrahedral nanocage, computationally designed, nanocage, expandable nanomaterials, DE NOVO PROTEIN ;; DE NOVO PROTEIN
实验方法 methodELECTRON MICROSCOPY
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2. SAXS 参数 (CRYSOL 理论计算) 2. SAXS Parameters (CRYSOL)

回转半径 Rg (Guinier) rg_guinier88.92 Å
回转半径 Rg (电子) rg_electron88.19 Å
零角强度 I(0) i08242910000.00
分子量 molecular_weight710970.0 kDa
排除体积 excluded_volume863670 ų
包络体积 envelope_volume2063800 ų
水化壳体积 shell_volume195340 ų
包络直径 envelope_diameter250.0 Å
壳层 Rg shell_rg97.40 Å
包络 Rg envelope_rg78.05 Å
形状 Rg shape_rg88.17 Å
总 Rg total_rg88.33 Å
总原子数 total_atoms89865
残基数 n_residues8328
球谐函数阶数 n_harmonics20
q 范围 q_range— – 0.5000 Å−1
数据点数 n_points101
壳层类型 shell_typedirectional
溶剂电子密度 solvent_density0.3340 e/ų
壳层衬度 contrast_shell0.0300 e/ų
CRYSOL 版本 crysol_version4.1.3
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3. P(r) 距离分布 (GNOM 反演) 3. P(r) Analysis (GNOM)

最大尺寸 Dmax dmax227.1 Å
Rg (实空间) rg_real87.90 Å
Rg 误差 (实空间) rg_real_error0.65 Å
I(0) (实空间) i0_real8.2410e+09
I(0) 误差 (实空间) i0_real_error1.5030e+08
Rg (倒空间) rg_reciprocal92.43 Å
I(0) (倒空间) i0_reciprocal8335000000.0000
解质量估计 total_estimate0.7709
解质量评级 solution_quality GOOD a GOOD solution
P(r) 峰数 n_peaks1
主峰位置 r_peak_primary133.6 Å
偏度 Skewness skewness-0.415
峰度 Kurtosis kurtosis-0.532
角度范围 angular_range— – 0.0850 Å−1
当前正则化参数 α current_alpha0.0068
最高正则化参数 α highest_alpha983600000.0000
实空间数据点数 n_real_points18
GNOM 版本 gnom_version4.1.3
质量判据 quality_criteria AN1: 0.000; Oscil: 0.716; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.871; Smooth: 0.000
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4. 晶体学与实验 4. Crystallography & Experiment

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5. 实体与聚合体信息 (1)

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7. 引用文献 (1)

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8. 文件与曲线 (10)