9evt

Structure of the small subunit of the flowering plant mitoribosome with the maturation factor RsgA

Method: ELECTRON MICROSCOPY D_max: 208.6 Å Quality: EXCELLENT

SAXS 散射曲线 SAXS Profile

P(r) 距离分布 P(r) Distribution

下载 Download SAXS (.dat) P(r) (.pr.out) CIF

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1. 结构基本信息 1. Structure Basics

条目编号 entry_id	9evt
沉积日期 deposition_date	2024-04-02
结构标题 title	Structure of the small subunit of the flowering plant mitoribosome with the maturation factor RsgA
关键词 keywords	mitochondria, mitoribosome, assembly factor, plant, RIBOSOME; RIBOSOME
实验方法 method	ELECTRON MICROSCOPY

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2. SAXS 参数 (CRYSOL 理论计算) 2. SAXS Parameters (CRYSOL)

回转半径 Rg (Guinier) rg_guinier	78.74 Å
回转半径 Rg (电子) rg_electron	81.11 Å
零角强度 I(0) i0	37042100000.00
分子量 molecular_weight	1251400.0 kDa
排除体积 excluded_volume	1406700 Å³
包络体积 envelope_volume	2342300 Å³
水化壳体积 shell_volume	238460 Å³
包络直径 envelope_diameter	346.9 Å
壳层 Rg shell_rg	80.71 Å
包络 Rg envelope_rg	83.38 Å
形状 Rg shape_rg	81.21 Å
总 Rg total_rg	80.86 Å
总原子数 total_atoms	85715
残基数 n_residues	8012
球谐函数阶数 n_harmonics	20
q 范围 q_range	— – 0.5000 Å⁻¹
数据点数 n_points	101
壳层类型 shell_type	directional
溶剂电子密度 solvent_density	0.3340 e/Å³
壳层衬度 contrast_shell	0.0300 e/Å³
CRYSOL 版本 crysol_version	4.1.3

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3. P(r) 距离分布 (GNOM 反演) 3. P(r) Analysis (GNOM)

最大尺寸 Dmax dmax	208.6 Å
Rg (实空间) rg_real	73.39 Å
Rg 误差 (实空间) rg_real_error	0.60 Å
I(0) (实空间) i0_real	3.5250e+10
I(0) 误差 (实空间) i0_real_error	6.2000e+08
Rg (倒空间) rg_reciprocal	77.25 Å
I(0) (倒空间) i0_reciprocal	36890000000.0000
解质量估计 total_estimate	0.9174
解质量评级 solution_quality	EXCELLENT a EXCELLENT solution
P(r) 峰数 n_peaks	2
主峰位置 r_peak_primary	83.4 Å
偏度 Skewness skewness	0.286
峰度 Kurtosis kurtosis	-0.494
角度范围 angular_range	— – 0.1000 Å⁻¹
当前正则化参数 α current_alpha	0.3971
最高正则化参数 α highest_alpha	2712000000.0000
实空间数据点数 n_real_points	21
GNOM 版本 gnom_version	4.1.3
质量判据 quality_criteria	AN1: 0.006; Oscil: 0.991; Stabil: 0.990; Sysdev: 1.000; Positv: 1.000; Valcen: 0.977; Smooth: 0.007

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4. 晶体学与实验 4. Crystallography & Experiment

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5. 实体与聚合体信息 (42)

Entity 1 polymer

描述 description	Ribosomal protein S2
分子量 formula_weight	23743.5 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	A
原子数 atom_count	85715

MTLHGAVIQKLLNTGSHLGRRAAEHHFKQYAYGTRNGMTIIDSDKTLICLRSAASFVANLASARGNIFFVNTNPLFDEIVELTSRRIQGDAYNHNRSTNLWKMGGFLTNSYSPKKFRSRHKKLCFGPTTMPDCVVVFDAERKSSVVLEAAKLQIPVVAIVDPNVPLEFFEKITYPVPARDSVKFVYLFCNVITKCFVAEQMKMGIKDGDLAA

Entity 2 polymer

描述 description	Small ribosomal subunit protein uS3m
分子量 formula_weight	64731.3 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	B

MARKGNPISVRLGKNRSSDSSWFSDYYYGKFVYQDVNLRSYFGSIRPPTRLTFGFRLGRCILLHFPKRTFIHFFLPRRPRRLKRREKTRPGKEKGRWWTTFGKAGPIGCLRDDTEEERNEVRGRGARKRVESIRLDDRKKQNEIRGWPKKKQRYGYHDRSPSIKKNLSKLLRISGAFKHPKYAGVVNDIAFLIENDDSFKKTKLFKFFFPKKSRSDGPTSYLRTLPAVRPSLNFLVMQYFFNTKNQMNFDPVVVLNHFVAPGAAEPSTMGRANAQGRSLQKRIRSRIAFFVESLTSEKKCLAEAKNRLTHFIRLANDLRFAGTTKTTISLFPFFGATFFFLRDGVGVYNNLDAREQLLNQLRVKCWNLLGKDKVMELIEKFKNLGGIEELIKVIDMMIEIILRKRGIPYRYNSYFYEVKKMRSFLSNRTNTKTLIESVKIKSVYQSASLIAQDISFQLKNKRRSFHSIFAKIVKEIPKRVEGIRICFSGRLKDAAEKAQTKCYKHRKTSCNVFNQKIDYAPVEVSTRYGILGVKVWISYSQKKGGRAISETYEI

Entity 3 polymer

描述 description	Ribosomal protein S4
分子量 formula_weight	43438.5 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	C

MWLLKKLIQRDIDMSPLRFQTCRLLLGNVWNRELTIIQRRILRRLRNRKRSIKKRKIYSKKYLTSYIQLQTTRKLSLFYGDLPITEMHRGTKRTSYIPFLLNLETRFDVILLRLHFLETIPQARQLISHRRVCVNKGMVSITHLKLSHGDIISFQENNAIIRGEEIRRSFYKEILVEKIIGKLLHQPLRMWRRSKTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLLKSLFLSKRRKEKNLNLPTRTISPIVYNSSLSLYSNSTYCFASPHKLTMKRRIKRIELPTHYLEVNYRTPKAVVFYGPNIGHIPHDIRLKDLNLLLWSRNGRGQNI

Entity 4 polymer

描述 description	S5 DRBM domain-containing protein
分子量 formula_weight	58296.7 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	D

MSFRTRASSWTRLLLRRNPRSSFSRQISSLDASGSAFPGRITPWISSQTHRFSSATTISPAEADRVVRDLLAEVEKEKQREREERQRQGLDCKDIDDEDEDEEDYLGIEPFIEKLKKQNLKDDGELNRREESSDSDSELDEVDWDEERKKEDMFNKKFQRHKELLQTLTKSETLDEAYKWMTKLDKFEEKHFKLAPEYRVIGELMNRLKVAEGKDKFILQQKINRAMRLVEWKEAFDPNNPANYGVIERDNVQGGEEKEERLVADGSKDDNDDNEEEFDDMKERDDILLEKLNAIDKKLESKLSELDHTFGKKGKRLEEEIRDLAEERNALTEKKRQPLYRKGYDVHVIDVKKVAKVTKGGRVERYTALMVCGNYEGVIGYAKAKAETGQSAMQKAYEKCFQNLHYIERHEEHTIAHAIQTSYKKTKLYLWPAPTTTGMKAGRVVKTMLLLAGFKNIKSKVIGSRNSYNTVKAVLKALNAVETPKDVQEKFGRTVVEKYLL

Entity 5 polymer

描述 description	bS6m
分子量 formula_weight	16011.4 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	E

MPLYDCMLLFKPIIRKEGLIDLVARIGKHVYSKNGVLTEVKSFGKVELGYGIKKLDGRHYQGQLMQITMMATPNINKELHYLNKDDKLLRWLLVKHRDIKIGSSEMEDRQDDSNRVTNRSLYDESSTDEDDDILGLSR

Entity 6 polymer

描述 description	uS7m,Small ribosomal subunit protein uS7m,Small ribosomal subunit protein uS7m
分子量 formula_weight	17955.1 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	F

XXXXXXXXXXGGLDGEQKLLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPICEVAKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYQKRGSARRKRENLHGLASTNRSFAHFRWW

Entity 7 polymer

描述 description	40S ribosomal protein S15a
分子量 formula_weight	14874.1 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	G

MGRRILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVHDPHRVGRITVDLQGRVNDCKALTYRQDVKAKEIEEYTERTLPTRQWGYVVVTTPDGILDHEEAIKRNVGGQVLGFFY

Entity 8 polymer

描述 description	30S ribosomal protein S9
分子量 formula_weight	42328.4 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	H

MLSRLFLRSSNLRLATLVSSKSNSQIFSSFIRPLSTNSSGGGGGNDSGNGGNRNDAPWSFSGVNDGKSDPFSSFESGSPGGDGKWPKEEPKRWNMKEEGDEKAVFGDVSNGFGDVKSSGWDVSSKPWDLKEDEEDGKVVFDTSGEMPVSFDNSLVNEEEERAKKELFEKEEKELTEVIKGPDRAFGDLIAKSGITDEMLDSLIALKDFQGVQGLPPLTEIENLRREKSSKKSSRAEIELQMQEEIAKARVRQVDEAGRAYGTGRRKCSIARVWIVPGKGKFLVNDKEFDVYFPMLDHRAALLRPLAETKTLGSWDINCTVTGGGTTGQVGAIQLGISRALQNWEPDMRTALRAAGFLTRDSRVVERKKPGKAKARKSFQWVKR

Entity 9 polymer

描述 description	Small ribosomal subunit protein uS10 domain-containing protein
分子量 formula_weight	25251.2 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	I

MIGVLRRSSLPSRHALSAALTSFDSGLSLNITSAATGASVKLNLVGNGSTLSSASFVISARDFHIRSEPSMVSPAKISFRGYATGSESSIGDSAKIKISPENVKPLSKKKKGGGESTSKIKGTRICIAIRSFDNPEKEAWCLPPHSRYAAMPDTRTLYTVLRSPHVDKKSREQFEMRFKKRFLVIKAQSHELSNKLFWLKRYRILGAQYELQFHCKTRLDMSPVLGSK

Entity 10 polymer

描述 description	Ribosomal protein S11
分子量 formula_weight	33108.2 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	J

MNGVSRHLRASSLPSLIRSYGGIKSVCRFSCQSDGSSGGRFGEQGRVPGDSENKSGLPDPNASPSKSFSEMRSGLLNKIGDGGYSAPNAPPTFRNPLRSRLPNTLPSQSGQMNQEGLPNTGGTGFSAPSYQSFTQSNLLKDNFRTGGISKDLDFVRGVIEDDEGRRATGLFSHFHRPNLETNADIIHIKLLRNNTFVTVTDSKGNVKCKATSGSLPDLKGGRKMTSYTADATAENIGRRVKAMGLKSVVVKVNGFTHFKKKRNAIVAFRSGYSNSRNDQNPIVYIEDTTRKAHNGCRLPRKRRV

Entity 11 polymer

描述 description	Small ribosomal subunit protein uS12m
分子量 formula_weight	14294.8 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	K

MPTFNQLIRHGREEKRRTDRTRALDKCPQKLGACLRVSTRTPKKPNSALRKIAKVRLSNRHDIFAYIPGEGHNLQEHSQVLIRGGRVKDLPGVKFHCIRGVKDLMGIPGRRRGRSKYGAEKPKSI

Entity 12 polymer

描述 description	uS13m
分子量 formula_weight	17398.3 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	L

MLGLRRSAATLFDHSQSLLRNLSFHGLRVQGIRVGNAEVPNHKPLKTGLQEVYGIGRRKSHQVLCGLGITNKLARDLTGKELIDLREEVGMHQHGDELRRRVGSEIQRLVEVDCYRGSRHRHGMPCRGQRTKTNARTKKGKRVAIAGKKKAPRK

Entity 13 polymer

描述 description	Small ribosomal subunit protein uS14m
分子量 formula_weight	17928.8 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	M

MANLRGVLTNVSSYCQRSFSQSALLWRSAVKPPNNLAQIQSRQISTSLAKHSGTEQGVKRNSADHRRRLLAARFELRRKLYKAFCKDPELPSEMREKNRYKLSKLPRNSAFTRIRNRCVFTGRSRSVTELFRMSRICFRGLANKGELVGIKKSSW

Entity 14 polymer

描述 description	Small ribosomal subunit protein uS15c
分子量 formula_weight	47211.2 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	N

MAFHLARRKQRLHSNPYLIHLFSTSSSSASPQDGNESGEQQPSQSPSDFKISSYFSGIKSSLKQQPQHQAQDGRRQLAGFDPKAPSFSGSGGDFQDVRRNLNEFRRRAAAPPARDLQDLYKQNVLSKSGDLGAGKVEGSPFENLKKNLRQMRPQETRWSNLSSLQSIMKAKDSGNVRSNVFGGGEGLPISVFGEEIEERKKMGDDSEEMKSEFIKSYNTKELGEILRQYRPEGKREEGWFSLQELNQRLVKLREVEEAAAQGARKGIAFDDLRSEIQQARKSQAFQNLDFFSVLNGTPKYLLEPPKDELVQTYFHPDNMSSAEKMKIELAKVREEFKMSESDCGSARVQVAQLTTKIKHLSSVLHKKDKHSKKGLIAMVHRRKKLLKYMRRTDWDSYCLSLSKLGLRDNPDYKF

Entity 15 polymer

描述 description	30S ribosomal protein S16
分子量 formula_weight	15330.8 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	O

MVVRLRLSRLGCKNRPFFRVMATDSRSPRDGKHIEVLGYFNPLPGQDGGKRMGLKFDRIKYWLSVGAQASDPVQRLLFRSGLLPPPPMVAMGRKGGERDTRPVDPMTGRFVDAEKKTPVIIDNQPKEEDNAQDKSP

Entity 16 polymer

描述 description	Small ribosomal subunit protein uS17c
分子量 formula_weight	12090.0 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	P

MKPVIGTVVSNKMQKSVVVAVDRLFHNKLYNRYVKRTSKFMAHDETNACNIGDRVKLDPSRPLSKHKNWIVAEIIKKARIYSPQAAAAAALSFSAAKSPSESSVPPVSSS

Entity 17 polymer

描述 description	Small ribosomal subunit protein bS18c
分子量 formula_weight	27106.1 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	Q

MKLAHSAIRSLSDVASFQTCRPFVSRSLSTNANQDDWMFGGKDEKANSFFQHLGKAEKDKRDYTGFSRSQGNGSRFDPSSDGVDGKLKEAALIYNVDDDEGVKDGYSFRPDVNSWGVNQFPRDMNFRRQMQRPRQNNKAEITTEEVLKKADFRNVRFLAQFITEAGILVKRKQTGISAKAQRKIAREIKTARAFGLMPFTTMGTKAFTFGKTMENRDQDFEYEVIDDDDEYDDNTPE

Entity 18 polymer

描述 description	Small ribosomal subunit protein uS19m
分子量 formula_weight	23675.2 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	R

MAFCTKLGGHWKQGVNVPVSSMLGSLRYMSTKLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAMNGQELNGFNISVNVAKDWPSLPLSLDESIEEAEKKENKMMSRSVWKDPFVDAFLMKKKNAALNRKIWSRRSTILPEYVDSAVRIYNGKTHVRCKITEGKVGHKFGEFAFTRKVKKHAKAK

Entity 19 polymer

描述 description	Ribosomal protein S21
分子量 formula_weight	11541.8 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	S

MNTIAKRVTGLLTRPSHSQLQQERGIRVKVFSGDLDKALTILQRKMQSSGMERLIKAQQTHHIKNSEKKVLARKNLERKIKSIDFARKLQSILIKKVRGL

Entity 20 polymer

描述 description	30S ribosomal protein S31, mitochondrial
分子量 formula_weight	10524.6 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	T

MMAAAQWCSSMTRLVMMMQRTSPALACSARYSSLCPAAASMEVCGRGDSKTKKGKRFKGSYGNSRGKKQKMIERIKDKLELPRSTPWPLPFKLI

Entity 21 polymer

描述 description	Small ribosomal subunit protein mS23
分子量 formula_weight	21934.5 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	U

MSWMKGDLLSKTRRLVGGLATREPVWLKAMEASPPPVFPRSNGNLKKIVLPEDPYVRRFARKHPEAKLVEPNKVSAFIPDQARVYGCRVLELTKNGISEDDAMSVANMEYLAERKEKKKAYKRLKELAVLQDKAPPPKPYLSTKKEMQTQEKKPPTDPPSVRRLVNQLKQQKDVLLQDKPGGSANQDHWIDE

Entity 22 polymer

描述 description	mS26
分子量 formula_weight	23093.6 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	V

MSLCNQLSRLVKQSPLTKQSLRSFSAEAATHHRHHQETHSFLEPESYIGSWEAPKDPKDAERMLAQLRRDYAKKVSLYRKDYVHEIEMLRVEKQRKDEARLVAERAANEERRRLKAEAAKVRAEERKIFQDEFRKTLMKERAEKLEFWRMTGLKREEKKKARKKLLHEQSSLWIEPKELEKKITEALVDSTTL

Entity 23 polymer

描述 description	Small ribosomal subunit protein mS29
分子量 formula_weight	54288.6 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	W

MFRSVVRITSRNFNLNRRSLIPNDAVSHFPSPPSASAATLIPSLDHAHRRRFSSSKSTKSSITKTKKSEGKKSKSKGGESGAAAGAEDGEFGGSAGDDLEAGRAKRLADDEKTPSLDVGPNGRPLFTPRDVTLSKLSQKDIGSYFNFDEAALKAVLPEGLASGIEDEFKESWRPALLVRKSFLDLRDNFRRIADPPMWPSEGKGGVKPKKQIILDGPVKSGKSIALAMLVHWARDEGWLVLYAPKGRDWTHGGYFYKNQHTGFWDTPLQAESILKDFVKFNEPRLRELRCNVYDPIVLGEGAGVGYLKGQETMPIPEDSTLYDLVQMGINSTHAAVSVVVRLRKELSLVKDVPVLIAIDQYNNWFTFSEFEEPVTPRSCRPIHARELTTVNAFRSMMHDDMMVGAFSHSTAVGKLRKDLPDVPADARQNFPRYSLDEAEAVCYYYLRQRLVRREVFSEENWKKIYYLANGNGAEMRWLVPFMR

Entity 24 polymer

描述 description	BnaC06g06470D protein
分子量 formula_weight	53476.2 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	X

MRGAIGRRLSNPSNGFSLASIVKHTPFLVQPTSHFSSSSSDGGAVRGRGRGRGGSGSPAAGAGQFGFNREPEKANEPVGQARGSSESQSPGGYGHGRGRPIQSDPISPPFSSFVKPDSHSVGRGRGSLRSDPVSPFSPEPPRHPAPPQPQQPRFEPAKDGVQGSPPFAKLEATKDATSPPPPPPPGAPNNISNALGSGAGRGKPFVQNEDNRHIQRSPQPLQRQKRVQPPKDTTPRPQLSPEEAGRRARSQLSRGEAEGGSGGGVRGRGGGRGRGRGARGRGRGRGGEGWRDDKKEEEAEQEALSVFVGDNADGEKFAKKMGDEIMAKLAEGYEDICERALPSTAHDALVDAYDTNLMIECEPEYLMPDFGSNPDIDEKPPMPLRECLEKVKPFIVALEGIKDQEEWEEAIGEAMAEAPRMKEIVDHYSGPDRVTAKKQNEELDRIATTVPQSAPDSVKRFADRVALSLKSNPGWGFDKKYQFMDKLVLEVSQNYK

Entity 25 polymer

描述 description	MOSC domain-containing protein
分子量 formula_weight	11631.6 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	Y

MASGSLKNLVTSAVTVGVTEARARIFGHMLNPTGQRSPHKILRKKLFGDKVAEWYPYDIKNEDPNVLAREEKERLSKLEMLKRRNKGPPQKGHGRRAAKRNK

Entity 26 polymer

描述 description	Mitochondrial 28S ribosomal protein S34
分子量 formula_weight	16650.2 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	Z

MAATLMNRAISRTETVGAFRLSLNLLRNFSAPAAAAAASPSTENPSSDSIKPKRRKKKNLIEVAQFLPNWGIGYHMAKAHWNGVSYEITKINLYKDGRHGKAWGIVHKDGLRAAEAPKKISGVHKRCWKYIPNLSKTTPATTGSAPAAEVQAA

Entity 27 polymer

描述 description	EngC GTPase domain-containing protein
分子量 formula_weight	55785.6 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	7

MQISSLSIIRHSSPFLLRRASIHHGGCGVRLGTGIGIRRSFHLLTLSARRDNPDVSRKPHPSKNMLRAKHIGKDHSSLAPVLSPDHNPSLLPSQAIGTVATAQANFMRVVVQDGDGDGDDRSSSTSSSKDGVELLCVVRAVLKKIRRRVLVGDKVLVGSIDWVDRRGMIENVFQRRSEILDPPVANVDHLLVLFSLDQPKLEPFTLTRFLVEAESTGIPLTLALNKCELITEEELESWKMRLRGWNYEPFFCSVGTKEGLDAIAFVLRNQTSVIVGPSGVGKSSLINILRSSSGGGDVEDENWFEPIIGNKWFEDQRVGEVSTRSGRGKHTTRNVSLLPITEGGYLADTPGFNQPSLLKVTKHSLALCFPEIRKMIEEEKCGFKDCLHIGEPGCVVKGEWERYPYYLQLLDEIRVREEFQLRTFGTKREGDVRYKVGGMGVKQAEPRLMPKKHRRESRKKVKQTMISELDEYEDEESDLDIEDDPIVQAIENEKER

Entity 28 polymer

描述 description	Small ribosomal subunit protein mS35 mitochondrial conserved domain-containing protein
分子量 formula_weight	48589.3 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	a

MRGALFRNASLCARRLLLSPRINTHQPSSSSNARFVAPIATPFPPRLFSSESDSSGENPPPPPESSSPIESSNKKDLAVEDVGNKELKARIEKYFNEGNEDALPGIIEALLQRRLADKHADTDDEVMDSLQNQPFKDDVKDEDFESDFEEAHSTDDELEDLYNSPEYVKKKMQNNEFFNMDEKKWDVIVRDGIRHGILKDTKECEEILEDMLHWDKLLPDDLKKKVEAKFNELGDMCERGEIEPEAAYELFKEFEDEMVIQYGDQMEAAGPPKFDETDPSYSNTNLDDPPGKGPILRWQSRIVFAPGGDAWHPKNRKVKLSVTVKELGLSKHQARRLRELVGKRYDSGKDELTITSERFEHREENRKDCLRTLYGLIEEAAKANKIAEDIRTAYVKQRLQANPAFMQKLQAKIMRSKESNPINA

Entity 29 polymer

描述 description	IMS import disulfide relay-system CHCH-CHCH-like Cx9C domain-containing protein
分子量 formula_weight	9227.9 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	b

MGRKAGNLYINPKKLGNLAKPCMKEMVSFLNCMALNNIKDDKCEKQKQLLSVCMQGQSDHKNKSWGNINYHLQRLTRGRK

Entity 30 polymer

描述 description	Small ribosomal subunit protein mS38
分子量 formula_weight	14562.2 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	c

MANLMQRFIRNQSCLRAIPKLTPNLIPHQKPCIIINNNVESPFPLTNPVIAFSGSGIKPDEALRFYPSFPIGYGLNPSVVHGSGLTDTVVEEKEKEVVIHADSVKKKRKKKMNKHKYRKLRKKQGRKS

Entity 31 polymer

描述 description	IGR domain-containing protein
分子量 formula_weight	12499.0 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	d

MAWMQMIQSARFLRKTQPFSTPSLARFYSKPAPYAVKVGIPEFLSGIGGGVETHVARLETELGDLSKLLVTRTLKLKKFGIPCKHRKLILKYSQKYRLGLWKPRADAIKA

Entity 32 polymer

描述 description	mS45
分子量 formula_weight	44013.5 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	e

MFKLSRMIPRLQSVSLNPSTTASGSLIENAPRIFQSLGNRAFSGKSSSDGSGSNENGWDIATGGSFGGGTTGGSDDLDWDHKSMWSTGLSKEHFDGVSVGRQNPSSENAVSDSGDVMSKLGPREVAMVNEMNEYDDMIKEIEKDNRHSRVFVDGIKQKMMEMSVLLKQVKEPGARGSYLKDSEKTEMYRLHKENPEVYTVERLAKDYRIMRQRVHAILFLKEDEEEEERKLGRPLDDSVERLLDEYPEFFVSHDREFHVASLSYKPDFKVMPEGWDGTIKDMDEVHYEISKKEDDILYEEFLRRFEFNKLKWKGEVKCHKYSRRRSSDGWKITVEKLGPQGKRGNGGGWKFVSLPDGSSRPLNEVEKMYVKREAPRRRRKILP

Entity 33 polymer

描述 description	mS47
分子量 formula_weight	45518.7 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	f

MQTVRALRRVTKPSQWVRSVSQGKRSFSALPNFSASDADVQDQVSVEGKAKSRAAILDRPSSLNALSAPMVGRLKRLYESWEENPAISFVLMKGSGKTFCSGADVLPLYHSINEGNTEECKHFFGSLYNFVYLQGTYLKPNIAIMDGVTMGCGGGISIPGMFRVATDKTVLAHPEVQIGFHPDAGASYYLSRLPGYLGEYLALTGQKLDGVEMIACGLATHFCLHSRLGMVEERIGKLLTDDPTVIEASLAQYSDLVYPDNTSVLHKIEMIDRYFGLDTVEEIIEAMENEVADSGNEWCKKTLKQVKEASPLSLKITLQSIREGRFQTLDQCLTREYRISLCGVSKTVSGDFCEGIRARLVDKDFAPKWDPPRLEDVSKDMVDCYFSPATDADDSESELKLPTAQREPYF

Entity 34 polymer

描述 description	(rape) hypothetical protein
分子量 formula_weight	43364.8 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	h

MQYLSNSRRIARALKPLALLEADVRFASHVVDSTQWQNHRSPSVSVSPGMNTQSHMTGLMMLRSSFSSEAKLVEDPTEAVKELHGKILDSVNVKRSMPPNALLWSLIENCRKEDDISFLFDALQNLRRFRLSNLRIHDNFNCNLCRQVAKTCVRVGAINHGKRALWKHNVHGLTPSVASAHHLLSYALEHKNSNLMDEVMKLLKANDLPLQPGTADLVFRICHETDSWDLLAKYSKKFCKAGVKLRKTTFDVWMEFAAKRGDTESLWKVDKLRSETYTQHTLSAAFSCAKGFLLEHKPEEAAAVIQIICQAYPDEKKSALEAEFKKLVNEWPVDVLKHQNEEDKKAVAASLKSDIPAMVNALVNSGLRVSVDLDELNKNEALLS

Entity 35 polymer

描述 description	PROP1-like PPR domain-containing protein
分子量 formula_weight	82648.8 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	i

MKSFLLSRQAIHRISLLSSKTPTFCRNFSAITSTISHSDRHLRSYDEQTPFQNVEIPRPISSFNRYFHFTRESRLSESSAAIDDSNDQEEDDEDGTTNEFLSRFVWIMRGKVSEAYPDCDKKMIDGMLLLIVEKVVEEIERGGFNKVGSAPPSPSSEFSDDLWATIWEVSNTVLKDMEKERKKEKMKQYVQSPEVMEMCRFAGEIGIRGDLLRELRFKWAREKMDDAEFYESLEQQRDLDNSIRESETVDGEVEEEGFVPSDEVESRSISLPKRKGKLKYKIYGLELSDPKWVEMADKIHEAEEEADWREPKPVTGKCKLVMEKLESLQEGDDPSGLLAEWAELLEPNRVDWIALINQLREGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAPPFELQVSLCCMYSGVRNEKKTLQALGVLEAKRDQMGPNEFDKVISALKRGGFEKDARRMYKYMEARKFLPSQRLQMDMVAPPRAFGSGSGRVRRFNS

Entity 36 polymer

描述 description	RRM domain-containing protein
分子量 formula_weight	16001.1 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	k

MHYMGLFSRAGNIFKQPRAMQAANAMLQGNLSLTPSKLFVGGLSPTTDVDILKEVFGKFGKIVDVVVVSDRETGVSKGFGFVTYDSIDAANKAMQQMNDQELDGRIIGVNPADSGGGGGGFARRGGYGGGRGGFGRGGFGRGGFGRGGYNFVR

Entity 37 polymer

描述 description	18S rRNA
分子量 formula_weight	504947.3 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polyribonucleotide
链编号 strand_id	2

CAUAGUCAAAAGAAGAGUUUGAUUCUGGCUCAGAAGGAACGCUAGCUAUAUGCUUAACACAUGCAAGUCGAACGUUGUUCUAAAAAAAAAAUUUUUUUUAAGAGUUGAGAACAAAGUGGCGAACGGGUGAGUAAGGCGUGGGAAUCUGCCGAACAGUUCGGGCUAAAUCCCGAAGAAAGCUAGAAAGCGCUGUUUGAUGAGCCUGCGUAGUAUUAGGUAGUUGGUUAGGUAAAGGCUGACCAAGCCGAUGAUGCUUAGCUGGUCUUUUCGGACGAUCAGCCACACCGGGACUGAGACACGGCCCGGACUCCCACGGGGGGCAGCAGUGGGGAAUCUUGGACAAUGGGCGCAAGCCUGAUCCAGCAAUAUUGCGUGAGUGAAGAAGGGCAAUUCCGCUCGUAAAGCUCUUUCGUCGAGUGCGCGAUCAUGACAUGACUCGAGGAAGAAGCCCCGGCUAACUCCGUGCCAGCAGCCGCGGUAAAACGGGGGGGGCAAGUGUUCUUCGGAAUGACUAGGCGUAAAGGGCACGUAGGCGGUUCAUCGGGUUGAAAGUGAAAGUCGUCAAAAAGUGGCGGAAUGCUUUCGAAACCACUGAACUUGAGUGAGACAGAGGAGAGUGGAAUUUCGUGUGGAGGGGUGAAAUCUACGGAUCUACGAAGGAACGCCAAAAGCGAAGGCAGCUCUCUGGGUCUCUACCGACGCUGGUGUGCGAAAGCAUGGGGAGCGAACGGGAUUAGAUACCCUGGUAGUCCAUGCCGUAAACGAUGAGUGUUCGCCCUUGGUCUAUUCUGAUCUGGGGCUCAGCUAACGCGUUAAACACUCCGCCUGGGGAGUACGGUCGCAAGACCAAAACUCAAAGGAAUUGACGGGGGCCUGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAUACAACGCGCAGAACCUUACCAGCCCUUGACAUAUGAACGAGAAACCCUAUCCUUAACGGGAUGGUACUGACUUUCAUACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUCGUGAGAUGUUUGGUUAAGUCCUAUAACGAGCGAAACCCUCGCCUUGUGUUGCUCAGACAUGCGCCUAAGGAGAACUCCGAAACAAACAAAAAGGUGCGUGACGCACUCACGAGGGACUGCCAGUGAUAUACUGGAGGAAGGUGGGGAUGACGUCAAGUCCGCAUGGCCCUUAUGGGCUGGGCCACACACGUGCUACAAUGGCAAUUACAAUGGGAAGCAAGGCUGUAAGGCGGAGCGAAUCCGGAAAGAUUGCCUCAGUUCGGAUUGUUCUCUGCAACUCGGGAACAUGAAGUUGGAAUCGCUAGUAAUCGCGGAUCAGCAUGCCGCGGUGAAUAUGUACCCGGGCCCUGUACACACCGCCCGUCACACCCUGGGAAUUGGUUUCGCCCGAAGCAUCGGACCAAUGAUCACCCAGCACUUCUGUGUAACACUAGUCACACAAAGACUUUUGGUGGUCUUAUUGACGCAUACCACGGUGGGGUCUUCGACUGGGGUGAAGUCGUAACAAGGUAGCCGUAGGGGAACCUGUGGCUGGAUUAUCC

Entity 38 non-polymer

描述 description	POTASSIUM ION
分子量 formula_weight	39.1 kDa
来源方法 src_method	syn
拷贝数 entity_count	10

Entity 39 non-polymer

描述 description	MAGNESIUM ION
分子量 formula_weight	24.3 kDa
来源方法 src_method	syn
拷贝数 entity_count	85

Entity 40 non-polymer

描述 description	ADENOSINE-5'-TRIPHOSPHATE
分子量 formula_weight	507.2 kDa
来源方法 src_method	syn
拷贝数 entity_count	1

Entity 41 non-polymer

描述 description	ZINC ION
分子量 formula_weight	65.4 kDa
来源方法 src_method	syn
拷贝数 entity_count	1

Entity 42 non-polymer

描述 description	GUANOSINE-5'-TRIPHOSPHATE
分子量 formula_weight	523.2 kDa
来源方法 src_method	syn
拷贝数 entity_count	1

▶

7. 引用文献 (1)

▶

晶胞边长 a length_a	1.000 Å
晶胞边长 b length_b	1.000 Å
晶胞边长 c length_c	1.000 Å
晶胞夹角 α angle_alpha	90.00 °
晶胞夹角 β angle_beta	90.00 °
晶胞夹角 γ angle_gamma	90.00 °
晶胞分子数 Z z_pdb	—

空间群 space_group	P 1
空间群编号 int_tables_number	1
晶系 crystal_system	—

分辨率 resolution	2.27 Å
分辨率测定方法 resolution_method	—
颗粒数 num_particles	208855

fit	/app/data/saxs_computation/ev/9evt/9evt.fit
pddf	/app/data/pr_computation/ev/9evt/9evt.pr.out
profile	/app/data/saxs_computation/ev/9evt/9evt.dat

Structure of the small subunit of the flowering plant mitoribosome with the maturation factor RsgA

SAXS 散射曲线 SAXS Profile

P(r) 距离分布 P(r) Distribution

1. 结构基本信息 1. Structure Basics

2. SAXS 参数 (CRYSOL 理论计算) 2. SAXS Parameters (CRYSOL)

3. P(r) 距离分布 (GNOM 反演) 3. P(r) Analysis (GNOM)

4. 晶体学与实验 4. Crystallography & Experiment

晶胞参数 Unit Cell

对称性 Symmetry

冷冻电镜 EM 3D

5. 实体与聚合体信息 (42)

Entity 1 polymer

聚合体 Polymer

Entity 2 polymer

聚合体 Polymer

Entity 3 polymer

聚合体 Polymer

Entity 4 polymer

聚合体 Polymer

Entity 5 polymer

聚合体 Polymer

Entity 6 polymer

聚合体 Polymer

Entity 7 polymer

聚合体 Polymer

Entity 8 polymer

聚合体 Polymer

Entity 9 polymer

聚合体 Polymer

Entity 10 polymer

聚合体 Polymer

Entity 11 polymer

聚合体 Polymer

Entity 12 polymer

聚合体 Polymer

Entity 13 polymer

聚合体 Polymer

Entity 14 polymer

聚合体 Polymer

Entity 15 polymer

聚合体 Polymer

Entity 16 polymer

聚合体 Polymer

Entity 17 polymer

聚合体 Polymer

Entity 18 polymer

聚合体 Polymer

Entity 19 polymer

聚合体 Polymer

Entity 20 polymer

聚合体 Polymer

Entity 21 polymer

聚合体 Polymer

Entity 22 polymer

聚合体 Polymer

Entity 23 polymer

聚合体 Polymer

Entity 24 polymer

聚合体 Polymer

Entity 25 polymer

聚合体 Polymer

Entity 26 polymer

聚合体 Polymer

Entity 27 polymer

聚合体 Polymer

Entity 28 polymer

聚合体 Polymer

Entity 29 polymer

聚合体 Polymer

Entity 30 polymer

聚合体 Polymer

Entity 31 polymer

聚合体 Polymer

Entity 32 polymer

聚合体 Polymer

Entity 33 polymer

聚合体 Polymer

Entity 34 polymer

聚合体 Polymer

Entity 35 polymer