9nta

Methanosarcina acetivorans 50S subunit obtained from methanol-grown cells

Method: ELECTRON MICROSCOPY D_max: 257.9 Å Quality: GOOD

SAXS 散射曲线 SAXS Profile

P(r) 距离分布 P(r) Distribution

下载 Download SAXS (.dat) P(r) (.pr.out) CIF

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1. 结构基本信息 1. Structure Basics

条目编号 entry_id	9nta
沉积日期 deposition_date	2025-03-18
结构标题 title	Methanosarcina acetivorans 50S subunit obtained from methanol-grown cells
关键词 keywords	Archaea, Methanosarcina acetivorans, Large subunit, 50S subunit, growth conditions, methanol, RIBOSOME; RIBOSOME
实验方法 method	ELECTRON MICROSCOPY

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2. SAXS 参数 (CRYSOL 理论计算) 2. SAXS Parameters (CRYSOL)

回转半径 Rg (Guinier) rg_guinier	69.92 Å
回转半径 Rg (电子) rg_electron	70.68 Å
零角强度 I(0) i0	64892800000.00
分子量 molecular_weight	1416600.0 kDa
排除体积 excluded_volume	1461000 Å³
包络体积 envelope_volume	2343800 Å³
水化壳体积 shell_volume	252210 Å³
包络直径 envelope_diameter	236.8 Å
壳层 Rg shell_rg	83.47 Å
包络 Rg envelope_rg	71.05 Å
形状 Rg shape_rg	70.73 Å
总 Rg total_rg	70.67 Å
总原子数 total_atoms	126102
残基数 n_residues	6940
球谐函数阶数 n_harmonics	20
q 范围 q_range	— – 0.5000 Å⁻¹
数据点数 n_points	101
壳层类型 shell_type	directional
溶剂电子密度 solvent_density	0.3340 e/Å³
壳层衬度 contrast_shell	0.0300 e/Å³
CRYSOL 版本 crysol_version	4.1.3

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3. P(r) 距离分布 (GNOM 反演) 3. P(r) Analysis (GNOM)

最大尺寸 Dmax dmax	257.9 Å
Rg (实空间) rg_real	72.82 Å
Rg 误差 (实空间) rg_real_error	1.62 Å
I(0) (实空间) i0_real	6.4890e+10
I(0) 误差 (实空间) i0_real_error	1.3450e+09
Rg (倒空间) rg_reciprocal	70.53 Å
I(0) (倒空间) i0_reciprocal	64990000000.0000
解质量估计 total_estimate	0.8849
解质量评级 solution_quality	GOOD a GOOD solution
P(r) 峰数 n_peaks	2
主峰位置 r_peak_primary	82.1 Å
偏度 Skewness skewness	0.531
峰度 Kurtosis kurtosis	0.341
角度范围 angular_range	— – 0.1100 Å⁻¹
当前正则化参数 α current_alpha	0.9745
最高正则化参数 α highest_alpha	5649000000.0000
实空间数据点数 n_real_points	23
GNOM 版本 gnom_version	4.1.3
质量判据 quality_criteria	AN1: 0.000; Oscil: 0.670; Stabil: 0.891; Sysdev: 1.000; Positv: 1.000; Valcen: 0.937; Smooth: 0.896

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4. 晶体学与实验 4. Crystallography & Experiment

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5. 实体与聚合体信息 (35)

Entity 1 polymer

描述 description	23S rRNA
分子量 formula_weight	937739.8 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polyribonucleotide
链编号 strand_id	BA
原子数 atom_count	126102

AGGAAUUAUGCUAUCAGGUGGAUGGCUCGGCUCAAGAGCUUAUGAAGGACGUGCCAAGCUGCGAUAAGCCCGGGGUAGGUGCAUGGAGCCAAUGAACCCGGGAUUUCCGAAUGGGACCUCUCCGUAGUGAUCAUUCAUGAUCGGGAACGCUCCGAAUUGAAACAUCUCAGUAGGAGCGGGAAAAGAAAUCAAUUGAGAUGCCGUAAGUAACGGCGAGUGAAACCGGCACAGUUCAAACCGAAUCCCUUCGGGGACAUGUGGUGUUGUAGGGCUGUUCAAACGUCUGGCGGUAAAAUCGAACUUGCCUGGAACGGCAGACCAUAGAGUGUGACAGUCACUUAGAUGUACGCCAAAAGACCGGAACAUGUCCCUGAGUACCGUGCGUUGGAUAUCGUGCGUGAAUCUGGGGGGCACCAACCUCCAAAACUAAAUACUCCUUGAGACCGAUAGCGAAAUAGUAGGGUGACCGAACGCUGAAAAGUACCCCGAGAAGGGAGGUGCAAAGUGCCUGAAACCUGAUAGUGAUGGAACGAUACGGCAUGAAAGGAUCUCUGGCAUGAAGGAAUCAUUCGCGAGGAUGUAGUACGAAUGUCACUGCCAGUGUCGUAUCUUACGUUUUGAAGAACGGGCCAGGGAGUGUAUCUUGGUGGCAAUGGCUAACCUUUUAUCUGGGCAGCCGAAGCGAAAGCAACAUGUGCGCAGCCUUUUGGCGAGGCACGACGUAUACAAGUGCGUGGAGUCACCGGGGUACGACCCGAAGCCGGGUGAUCUAGGCGUGGGCAGGUUGAAGCGUGGCGAAAGCUACGUGGAGGACCGUAAACGGUAUUGAUCUGCAAAUCAUUCGUGUGACCUGCGUCUCGUAGUGAAAUGCUAAUCUAACCCGGCAUCCGCUGGUUCCUUCCGAAACAUGUCGCAGCAUGACCUGACUUGAGAUCGUCGGUGGAGUAGAGCACUGAUUGGCGAUUCCGGGGGAGAAAUCCCUCGCUCGCUUGUCAAACUCCAAACCCCCCGUCAUCCUAGAAAGUCGGAGUCCGGACUGCUGGGGUAAGCUUGUAGUCCGUAAGGGAGACAACCCAGCCCGUGGUUAAGGUCCCCAAGUGUCGACUAAGUGUUAAUACUAAAGGGCGUCCCAAGCCCCAGACAGCUGGAAGGUUAGCUUAGAAGCAGCUACCCUUCAAAGAGUGCGUAACAGCUCACCAGUCGAGGUUUGGGGCCCCGAAAAUUGACGGGGCUCAAGUCGACCACCGAUACCACGGAGUACCGCAAGGUAAUCUCGUAGGAAGGCGUUGUGUUCGGGUCGAAGCAGGGCUGUGAAGUCCUGUGGACCGUUCACAAACGAAAAUCCUGGUAAUAGUAGCAGCAAAGCAGGGUGAGACUCCCUGCCGCCGAAGGGGCCAGGUUUCCUCGGCAAUGUUCGUCAGCCGAGGGUUAGUCGGUCCUAAGACGUACCGUAAUUCGAGUACGCCGAAAGGGAAACAGGUUAAUAUUCCUGUACCAUUUAGCGUUUAGUCUGACGUCUCAGGGCAAGCCGAGCGGCGUCGUCGCGCCGUCUAAGCAGCGAACCCCGUGGAGAGCCGUAAUGGCGAGAAGCGGGCGAAUCUGUAAUGGCACAAGUCGGCUUCACCCCGGGACCCGUGAAAAGGACAGCUAAAUGUCCGUACCGAGAACUGACACAGGUGCCCCUAGCUGAAAAGGCUAAGGCGUGUCGGAGUAAUUCAGUUAAGGGAAUUCGGCAAAUUAGCUCCGUAACUUCGGGAUAAGGAGUGCCUGCUGUGUAGACAGCAGGUCGCAGUGACCAGGGGGCUCUAACUGUCUAAUACCAACAUAGGAGAUUGCAAACCCGUAAGGGCUAGUACAAUCUCUGAAUCCUGCUCAGUGCAGGUACCUGAAACCCCGGUUCAACGGGAAGAAGGGCCUGUAAACAGCGGGGGUAACUAUGACCCUCUUAAGGUAGCGUAGUACCUUGUCGCUUAAUUGGCGACUUGCAUGAAUGGAUCAAUGAGAGCCCUACUGUCCCUAACUGGAGUCCGGUGAAGCUUACAUUCUAGUGCACAGUCUAGAGACCUCUAGGGGGAAGUGAAGACCCCGUGGAGCUUUACUGCAGCCUGUCGUUGGGUUGUGGUUCUGGAUGUACAGUGUAGGUAGGAGGCAUCGAAGCGGGUGCGCCAGCAUUCGUGGAGCCGUCCUUGGGACACUACCCUUCCGGGACUACGACCCUAACUCUGAGAAGAGGACCCCGAUAGGUGGGCAGUUUGCCUGGGGCGGGACGCCCUUGAAAAGAUAUCAAGGGCGCGCAAUGGUUGACUCAAGCGGGUCGGAAACUCGCUGAAGAGUGCAAGAGCAUAAGUCAGCCUGACGUUAUUCAGCAUAGCAGUGGAUGACGAGACGAAAGUCGGCUCUAGCGAACUUUUGAGCCUCCUUGGUGGGGGCCAAAAAUGACAGAAAAGUUACCCCGGGGAUAAUUGAGUCGUUGCCGGCAAGAGUACAUAUCGACCCGGCAGCUUGCUACCUCGAUGUCGGUUCUUUCCAUCCUGGCCGUGCAGCAGCGGCCAAGGGUGAGGUUGUUCGCCUAUUAAAGGAGAUCGUGAGCUGGGUUUAGACCGUCGUGAGACAGGUCGGUUACUAUCUACUAGAGGUGCCCGAGGUCUGCGGGUAAGCUGCUUUUAGUACGAGAGGAACCAAGCAGCGGCGCCACUGGUGUACCGGUUGUCUGACAAGGCAUCGCCGGGCAGCUACGCGCUCAGGAAUAAGAGCUGAAUGCAUCUAAGCUCGAACUCUGACCUAAAAAGAGACCUCUUUAAGGAUUCCGGUAAAAGACCGGUUUGAUAGAAACGGGAUGUAAGCACCAAGGCAACGAGGUGUUCAGUCCGCGUUUACUAACCAUUCGUUCCUUUCACUU

Entity 2 polymer

描述 description	5S rRNA
分子量 formula_weight	41399.6 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polyribonucleotide
链编号 strand_id	BB

GAGUUUGGCGGCCAUAGCGGUAGGGCAACUCCUGUACCCAUCCCGAACACAGCAGAUAAGCCUGCCCGCGUUCCUUACUGUACUGAAGUGUGCGAGCCUUCGGGAACUCUGGAUCGCUGCCAAGCUCAC

Entity 3 polymer

描述 description	Large ribosomal subunit protein uL2
分子量 formula_weight	25738.6 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	BC

MGKRLISQNRGRGTPTYRAPSHKYKADLRHPRVDENSSLRGEVVGIEHDPARSAPIAKVAFENGEELFLLASEGIAVGNIIECGDDAEVKPGNIVPIGNVPEGFFICNVESKPNDGGKFVRSSGVYATVVTHEATRTAVSMPSGNIKWLNPKCRAVVGIVAGSGRVDRPWLKAGKKYHKMKTRAAKYPRVSAVAMNPRDHPFGGGAWKHPGKPTTVSRNAPPGRKVGLIAARRTGMKR

Entity 4 polymer

描述 description	Large ribosomal subunit protein uL3
分子量 formula_weight	36949.6 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	BD

MASIHRPKRGSLAFSPRKRAKSHIPRFRAWPEATGEPKLQSFAGYKVGMTHVIMVDDTKNSLTQGMEISVPVTVIETPAIRVAAIRAYAEDSTGEKAIAEVWAADLDPELKRRIPIPAAGNQAEALENIGKLIEEGRVSDVRAVIYTLPKSLTGVPKKVPDIMESGISARDLGTKFEYSKTILGTLVSVTDVFKNGTLVDTAAITIGKGTQGPVKRWGIQLMKGKHSRQGSLRQVGTLGAFNPSRVSWRVPQMGQMGYHQRTEFNKRILKIGSDGEEVTPEGGFINYGLVRGDYILIKGSVPGPSKRLIRLRDPIRAKKADLGEPNILYISRESKQG

Entity 5 polymer

描述 description	Large ribosomal subunit protein uL4
分子量 formula_weight	27516.6 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	BE

MATAKTIDLTGKAVGEVELPAVFDADYRPDLIKKAVLAAQANRLQPYGPRLYSGMETSARGWGSGRGVSHVPRLVNSSRAARVPHAKGGRRAHPPKPEADRSEKVNTKERRYAIRSAIAATTDPTLVSLRGHIFEAELPIVAVNDLESLERTKQVIEFLEAAGLYEDVLRAKYGRHIRAGRGKLRGRKYKHKKSVLIVAGENTPILKAARNLSGVDVVTVDSLNAELLAPGTHAGRLTVWTESAIGKLEGAFQ

Entity 6 polymer

描述 description	Large ribosomal subunit protein uL5
分子量 formula_weight	18398.3 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	BF

MRTPIVEKVIVHMGVGESGQHLVNAEDILRNITGQEVVRCFAKRTLPAFSIKKNEPIGCKVTLRGQKAQEFLETALGIVEKTLNRSQFDSFGNVSFGIEEHTDFPGMRYDPNIGVFGMDVTVVLKRPGERICKRRIAARKIPAGHRVTVDDAIAFLNESYGVEVM

Entity 7 polymer

描述 description	Large ribosomal subunit protein uL6
分子量 formula_weight	19530.7 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	BG

MVKEIARTIEIPEGVSVSLAQDVFTATGPKGTVERKLWYPGIMIDVKDGEVVVDAEYARKEQKAMVGTFASHIRNLVKGVNEGFECKMSIVYAHFPMQVKVDGKTLIIGNFLGEKKPRFAKIIGETKVKVSGNDVTITGINKEDVGQTAANIEQKTKIKRFDPRIFQDGIYIVQKA

Entity 8 polymer

描述 description	Large ribosomal subunit protein eL8
分子量 formula_weight	12741.7 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	BH

MAQLAKFDVPEELTNKALEALELARDTGKIKKGTNEATKAIERGNAKLVLIAEDIEPAEIVAHIGPLSEEKKAPYIFIKNQKELGAASGLGVSCATVAIVDAGKAAEMVQDIAQKLEALK

Entity 9 polymer

描述 description	Large ribosomal subunit protein uL16
分子量 formula_weight	19409.6 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	BI

MVRKPGSMYRNVRQRSFTRRKYMGGVPGSQVIHYDMGDKANTSFPVKISLIVEEKCQIRHTALEAARITANRHLVADTGKMGFYMKLRVYPHEVIRENKQATGAGADRVSSGMRRAFGKNVGTAARVKPMQKIFTVAVEKQNFKAAKEALWHAGQKLPTPCRIVVDEGAELVQ

Entity 10 polymer

描述 description	Large ribosomal subunit protein uL13
分子量 formula_weight	16085.8 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	BJ

MLKMTVIDAKGLILGRLASSVAKQLLSGDEKVYIINAEQAIISGSRAATLREYRETRERGATEFGPYFPKRPDRILKRTIRGMLPYKRARGRDAMSRLKVYVGVPYELKGAETVTIPDADMRLLSSSRYVELGEVSQKMGSKF

Entity 11 polymer

描述 description	Large ribosomal subunit protein uL14
分子量 formula_weight	14356.9 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	BK

MKGMRSNIPRALNAGAQIACVDNTGAKVVEIISVKKYRGVKNRMPCAGIGDMCVVSVKKGTPEMRKQVLLAVVVRQKQEFRRPDGLHVSFEDNAMVITDEEGIPKGTDIKGPVAREVAERFPKIGTTASIIV

Entity 12 polymer

描述 description	Large ribosomal subunit protein uL15
分子量 formula_weight	15129.0 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	BL

MDTKKFRGSRTCGGGTHKNRRGAGNRGGRGKAGGCKHHFVRAMMRGYSYGKHGFKRPDEVSRDVSIVNVGELDELASYLVEEGLAEVKDGAYHINLENLGIEKVLGSGRVTKNLVVTSEEFSASAREKIENAGGSCIDAE

Entity 13 polymer

描述 description	Large ribosomal subunit protein eL15
分子量 formula_weight	22650.1 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	BM

MVKSFYGYVRDAWKNPDETYVNELRWERLQVWRKQGSVTRIERPTRIDRARSLGYKAKQGIVVVRVNVRRGGLGHVRPNRGRRTQKMGKNKVSGGMSIQRIAEVRADRRYPNLEVLNSYWVGEDGKHKWFEVILVDPHHPVIKSDKNLNWVCDPSSRGRATRGKTSAGRKGRGMATRGKGTEKTRPSIRAYKSRGK

Entity 14 polymer

描述 description	Large ribosomal subunit protein uL18
分子量 formula_weight	19233.7 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	BN

MATGPRYKVPFRRRREGRTNYHLRLKLLLSRQDRVVVRKSSRNVQIQLIAPTPDGDITYSSAVSNELAKYGYTGATGNTTAAYLTGLLFGLKSLQKGYEGGILDIGLQASSAGSRVYAALKGVVDSGFEIPCSPEVFPPDERIRGEHIAGYREESSDLPEQFEATKEKIFAEFS

Entity 15 polymer

描述 description	Large ribosomal subunit protein eL18
分子量 formula_weight	13715.0 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	BO

MGKKSLVKLTRKTNPRIVSLILTLKERANGDSAPIWKDIAKRLEAPSRNYAAVNISKINRHTAEDDVLLIPGKVLGAGLLDHPVTIAALTFSDSAFEKITEAGGKCLSLEEIMEANPKGSGIRIFR

Entity 16 polymer

描述 description	Large ribosomal subunit protein eL19
分子量 formula_weight	17062.0 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	BP

MSDLSNQRKLASKVLGCGLDRVWLNPEASEEIASAITREDIRGLIEEGTIKAKPVKGVSRGRARALAAKRKYGHCKGHGSRKGKKGARTPKKEQWIKKIRALRRRLKELRADGALDKSVYCRLYRKAKGGEYRSVSHLNSHLESEKLLKKE

Entity 17 polymer

描述 description	Large ribosomal subunit protein eL20
分子量 formula_weight	6972.0 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	BQ

MVMMKSFIVKGKFKAGSTWEKFTKKIESQNEKNATDKTYSIFGSKHGVKRSQVQIESVAEE

Entity 18 polymer

描述 description	Large ribosomal subunit protein eL21
分子量 formula_weight	11063.7 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	BR

MTNSHGEKRCTRYKLQKTVRERGISPVSRAIQEFEEGQMVHIDIDPSVQKGMPNPKFQGSTGKVIGQRGRSYVLEVRSGNAMKEVFSLPQHLKPQKY

Entity 19 polymer

描述 description	Large ribosomal subunit protein uL22
分子量 formula_weight	16764.6 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	BS

MARINYSINGDPETTSKAMGSELHISPKKSREVCCKIKGMKASEARKFLEDVIAMKQAVPFKKHHDGSGHRKGPMAAGKYPISASKEILKVLKNAESNAEYKGLEPANMYIIHAAIQRGRVIHGFMPRARGRATPKDTETVNIEMILSEVR

Entity 20 polymer

描述 description	Large ribosomal subunit protein uL23
分子量 formula_weight	9447.2 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	BT

MSSINYPFVTEKAMMLLDENKLQFIVDTRSNKKQILEDVEKMYGFKVKSVRTMTTMKGMKKAVLAFEEPEAAHEIATRIGLM

Entity 21 polymer

描述 description	Large ribosomal subunit protein uL24
分子量 formula_weight	13075.3 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	BU

MIAMVSKQPRKQRKARYAAPLHIRQKFMGARLSEALTKEYGTRSAAVITGDTVKVMRGDFKGTEGKVQSVSLMDGTITVDGVISTKVDGTEVPRPLNPSNVMITKLEMKDGRRASSIKK

Entity 22 polymer

描述 description	Large ribosomal subunit protein eL24
分子量 formula_weight	7204.6 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	BV

MEQRKCYFCGKMLEPGTGKLYVKKDGSTYFMCSSKCMSNFALGRLPRRTEWTEKGKIQLKKA

Entity 23 polymer

描述 description	Large ribosomal subunit protein uL29
分子量 formula_weight	7622.6 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	BW

MAILRTSEIRTMTIEERADELENLNNELVRERALTSAGGAPENPGRIGEIRRTIARIKTIQHELNEI

Entity 24 polymer

描述 description	Large ribosomal subunit protein uL30
分子量 formula_weight	17627.4 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	BX

MYAVVRLRGQVNVRYTIEDTMKMLRLHKVNHCVFVPENPHYKGMVQKVKDYVAYGKIDAKTLAEVLENRGRLEGDTRLTEEYIRENTDYDSIQAFAEAVIEGKSSLKDIPKLKPVFRLHPPRKGHAGIKRTVQQGGVLGNHDENINVLLHKMR

Entity 25 polymer

描述 description	Large ribosomal subunit protein eL30
分子量 formula_weight	10316.2 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	BY

MMKMKINVDKSLIKAVKTGKVIVGANRTIDAAANGSAKMVVLASNCPEDIKKKIQATDIPVLEYEGTSVELGPVCGKPFTIAAMAILDVGESDILAATA

Entity 26 polymer

描述 description	Large ribosomal subunit protein eL31
分子量 formula_weight	10331.1 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	BZ

MADDMVKEQIYTIPLREVRKVPAWKRANRAVIEVRGFLVRHMKTESVQVKLDKSINEHLWEKGCEKPPLSIRVRAVKFADGEVQAELAQ

Entity 27 polymer

描述 description	Large ribosomal subunit protein eL32
分子量 formula_weight	17880.4 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	Ba

MIMMAEEFNEVEGTNEVEDINEVEGTSVSTLDMDPESRRLFNVRKVQKGKKPQFKRTCSHKFKRLDDNWRRPRGSQGKQRRKYVSKGALVQVGYGSPAAVKGLHPSGYSDVLISSIAELELVDPSYEAIRIAGTIGAQKKALILAKAEEAGIKVLNSGRSE

Entity 28 polymer

描述 description	Large ribosomal subunit protein eL43
分子量 formula_weight	10557.5 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	Bb

MAKKFTKKGRISRSAGRFGPRYGRKDRKLVADLEERMRAPHVCTKCARPTVERIGTGIWKCSKCGHTFAGGTYIPYTSVGQTLLRTMKNIAEAK

Entity 29 polymer

描述 description	Large ribosomal subunit protein eL37
分子量 formula_weight	6456.6 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	Bc

MSKGTSSMGKRQKRTHAKCRRCGSVSFNVHTKQCTSCGFGKTSRMRTYKWQAKCKY

Entity 30 polymer

描述 description	Large ribosomal subunit protein eL39
分子量 formula_weight	6257.5 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	Bd

MSHNMKGQKKRLAKAHKQNTRVPVWVIVKTNRKVVSHPRRRHWRRRSLDVK

Entity 31 polymer

描述 description	Large ribosomal subunit protein eL40
分子量 formula_weight	5964.2 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	Be

MTKMARFPEAEERLLNKKICMKCNARNAIRATRCRKCGYGTLRVKSKESKGA

Entity 32 polymer

描述 description	Large ribosomal subunit protein eL42
分子量 formula_weight	10873.0 kDa
来源方法 src_method	nat
拷贝数 entity_count	1

聚合体 Polymer

聚合体类型 type	polypeptide(L)
链编号 strand_id	Bf

MKIPKRFRTYCPFCKTHNEVVVERVKKGQASSMTHIARQKKRQEGIGNSGKFSKVPGGDKPTKRIWLRYRCTVCKKAHQRPCFRAKKFEFKE

Entity 33 non-polymer

描述 description	MAGNESIUM ION
分子量 formula_weight	24.3 kDa
来源方法 src_method	syn
拷贝数 entity_count	43

Entity 34 non-polymer

描述 description	POTASSIUM ION
分子量 formula_weight	39.1 kDa
来源方法 src_method	syn
拷贝数 entity_count	11

Entity 35 non-polymer

描述 description	ZINC ION
分子量 formula_weight	65.4 kDa
来源方法 src_method	syn
拷贝数 entity_count	5

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7. 引用文献 (1)

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晶胞边长 a length_a	1.000 Å
晶胞边长 b length_b	1.000 Å
晶胞边长 c length_c	1.000 Å
晶胞夹角 α angle_alpha	90.00 °
晶胞夹角 β angle_beta	90.00 °
晶胞夹角 γ angle_gamma	90.00 °
晶胞分子数 Z z_pdb	—

空间群 space_group	P 1
空间群编号 int_tables_number	1
晶系 crystal_system	triclinic

分辨率 resolution	2.38 Å
分辨率测定方法 resolution_method	—
颗粒数 num_particles	197922

fit	/app/data/saxs_computation/nt/9nta/9nta.fit
pddf	/app/data/pr_computation/nt/9nta/9nta.pr.out
profile	/app/data/saxs_computation/nt/9nta/9nta.dat

Methanosarcina acetivorans 50S subunit obtained from methanol-grown cells

SAXS 散射曲线 SAXS Profile

P(r) 距离分布 P(r) Distribution

1. 结构基本信息 1. Structure Basics

2. SAXS 参数 (CRYSOL 理论计算) 2. SAXS Parameters (CRYSOL)

3. P(r) 距离分布 (GNOM 反演) 3. P(r) Analysis (GNOM)

4. 晶体学与实验 4. Crystallography & Experiment

晶胞参数 Unit Cell

对称性 Symmetry

冷冻电镜 EM 3D

5. 实体与聚合体信息 (35)

Entity 1 polymer

聚合体 Polymer

Entity 2 polymer

聚合体 Polymer

Entity 3 polymer

聚合体 Polymer

Entity 4 polymer

聚合体 Polymer

Entity 5 polymer

聚合体 Polymer

Entity 6 polymer

聚合体 Polymer

Entity 7 polymer

聚合体 Polymer

Entity 8 polymer

聚合体 Polymer

Entity 9 polymer

聚合体 Polymer

Entity 10 polymer

聚合体 Polymer

Entity 11 polymer

聚合体 Polymer

Entity 12 polymer

聚合体 Polymer

Entity 13 polymer

聚合体 Polymer

Entity 14 polymer

聚合体 Polymer

Entity 15 polymer

聚合体 Polymer

Entity 16 polymer

聚合体 Polymer

Entity 17 polymer

聚合体 Polymer

Entity 18 polymer

聚合体 Polymer

Entity 19 polymer

聚合体 Polymer

Entity 20 polymer

聚合体 Polymer

Entity 21 polymer

聚合体 Polymer

Entity 22 polymer

聚合体 Polymer

Entity 23 polymer

聚合体 Polymer

Entity 24 polymer

聚合体 Polymer

Entity 25 polymer

聚合体 Polymer

Entity 26 polymer

聚合体 Polymer

Entity 27 polymer

聚合体 Polymer

Entity 28 polymer

聚合体 Polymer

Entity 29 polymer

聚合体 Polymer

Entity 30 polymer

聚合体 Polymer

Entity 31 polymer

聚合体 Polymer

Entity 32 polymer

聚合体 Polymer

Entity 33 non-polymer

Entity 34 non-polymer

Entity 35 non-polymer

7. 引用文献 (1)

8. 文件与曲线 (10)