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9psi

In situ structure of the human mitoribosome in the A-P-E state from TACO1-knockout cells

Method: ELECTRON MICROSCOPY Dmax: 235.7 Å Quality: EXCELLENT

SAXS Profile

SAXS profile for 9psi

P(r) Distribution

P(r) distribution for 9psi

1. Structure Basics

entry_id9psi
deposition_date2025-07-25
titleIn situ structure of the human mitoribosome in the A-P-E state from TACO1-knockout cells
keywordsmitochondria, mitoribosome, inner membrane, RIBOSOME; RIBOSOME
methodELECTRON MICROSCOPY

Download Data

2. SAXS Parameters (CRYSOL)

rg_guinier90.61
rg_electron95.13
i0149405000000.00
molecular_weight2636800.0 kDa
excluded_volume3023500 ų
envelope_volume5088100 ų
shell_volume411420 ų
envelope_diameter327.0
shell_rg106.60
envelope_rg94.12
shape_rg95.42
total_rg94.42
total_atoms181394
n_residues17658
n_harmonics20
q_range— – 0.5000 −1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3

3. P(r) Analysis (GNOM)

dmax235.7
rg_real87.41
rg_real_error0.43
i0_real1.4290e+11
i0_real_error2.5470e+09
rg_reciprocal91.57
i0_reciprocal149900000000.0000
total_estimate0.9133
solution_quality EXCELLENT a EXCELLENT solution
n_peaks2
r_peak_primary110.9
skewness0.160
kurtosis-0.545
angular_range— – 0.0850 −1
current_alpha0.6131
highest_alpha11100000000.0000
n_real_points18
gnom_version4.1.3
quality_criteria AN1: 0.001; Oscil: 0.994; Stabil: 0.965; Sysdev: 1.000; Positv: 1.000; Valcen: 0.998; Smooth: 0.000

4. Crystallography & Experiment

5. Entities & Polymer Info (102)

6. Citations (1)

7. Files & Curves (10)