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9psm

In situ structure of the human mitoribosome in the A/P-P/E state

Method: ELECTRON MICROSCOPY Dmax: 236.4 Å Quality: EXCELLENT

SAXS Profile

SAXS profile for 9psm

P(r) Distribution

P(r) distribution for 9psm

1. Structure Basics

entry_id9psm
deposition_date2025-07-25
titleIn situ structure of the human mitoribosome in the A/P-P/E state
keywordsmitochondrial ribosome, RIBOSOME; RIBOSOME
methodELECTRON MICROSCOPY

Download Data

2. SAXS Parameters (CRYSOL)

rg_guinier90.89
rg_electron95.22
i0148347000000.00
molecular_weight2642100.0 kDa
excluded_volume3037400 ų
envelope_volume5096800 ų
shell_volume414210 ų
envelope_diameter326.7
shell_rg106.30
envelope_rg93.62
shape_rg95.50
total_rg94.52
total_atoms181859
n_residues17845
n_harmonics20
q_range— – 0.5000 −1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3

3. P(r) Analysis (GNOM)

dmax236.4
rg_real87.76
rg_real_error0.43
i0_real1.4180e+11
i0_real_error2.2970e+09
rg_reciprocal91.95
i0_reciprocal148800000000.0000
total_estimate0.9133
solution_quality EXCELLENT a EXCELLENT solution
n_peaks1
r_peak_primary111.3
skewness0.148
kurtosis-0.552
angular_range— – 0.0850 −1
current_alpha0.7313
highest_alpha10840000000.0000
n_real_points18
gnom_version4.1.3
quality_criteria AN1: 0.001; Oscil: 0.996; Stabil: 0.963; Sysdev: 1.000; Positv: 1.000; Valcen: 0.998; Smooth: 0.000

4. Crystallography & Experiment

5. Entities & Polymer Info (102)

6. Citations (1)

7. Files & Curves (10)