9q2y
Phosphodiesterase from Burkholderia phage BCSR5 in the open lid conformation
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9q2y |
| deposition_date | 2025-08-15 |
| title | Phosphodiesterase from Burkholderia phage BCSR5 in the open lid conformation |
| keywords | Phosphodiesterase, VIRAL PROTEIN; VIRAL PROTEIN |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 21.40 Å |
| rg_electron | 20.12 Å |
| i0 | 22906200.00 |
| molecular_weight | 36409.0 kDa |
| excluded_volume | 45520 ų |
| envelope_volume | 55365 ų |
| shell_volume | 22645 ų |
| envelope_diameter | 64.5 Å |
| shell_rg | 26.90 Å |
| envelope_rg | 20.18 Å |
| shape_rg | 20.13 Å |
| total_rg | 21.00 Å |
| total_atoms | 2566 |
| n_residues | 320 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 65.3 Å |
| rg_real | 21.24 Å |
| rg_real_error | 0.32 Å |
| i0_real | 2.2910e+07 |
| i0_real_error | 2.6270e+05 |
| rg_reciprocal | 21.27 Å |
| i0_reciprocal | 22910000.0000 |
| total_estimate | 0.9051 |
| solution_quality | EXCELLENT a EXCELLENT solution |
| n_peaks | 1 |
| r_peak_primary | 64.4 Å |
| skewness | 0.071 |
| kurtosis | -0.556 |
| angular_range | — – 0.3700 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 5214000.0000 |
| n_real_points | 69 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.928; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.987; Smooth: 0.992 |