9qdo
Crystal structure of the aromatic oligoamide foldamer binder Nanofitin C10 fused to a coiled-coil domain
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9qdo |
| deposition_date | 2025-03-06 |
| last_revision | 2026-03-18 |
| title | Crystal structure of the aromatic oligoamide foldamer binder Nanofitin C10 fused to a coiled-coil domain |
| keywords | Nanofitin, Foldamer-binder, Coiled-coil dimer, DE NOVO PROTEIN; DE NOVO PROTEIN |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 27.36 Å |
| rg_electron | 27.16 Å |
| i0 | 9044310.00 |
| molecular_weight | 22846.0 kDa |
| excluded_volume | 28738 ų |
| envelope_volume | 42023 ų |
| shell_volume | 14241 ų |
| envelope_diameter | 91.7 Å |
| shell_rg | 31.75 Å |
| envelope_rg | 26.50 Å |
| shape_rg | 27.19 Å |
| total_rg | 27.68 Å |
| total_atoms | 1608 |
| n_residues | 198 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 89.6 Å |
| rg_real | 27.72 Å |
| rg_real_error | 0.97 Å |
| i0_real | 9.0440e+06 |
| i0_real_error | 1.3900e+05 |
| rg_reciprocal | 27.61 Å |
| i0_reciprocal | 9044000.0000 |
| total_estimate | 0.5903 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 2 |
| r_peak_primary | 18.5 Å |
| skewness | 0.410 |
| kurtosis | -0.677 |
| angular_range | — – 0.2900 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 646100.0000 |
| n_real_points | 59 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.731; Stabil: 1.000; Sysdev: 0.127; Positv: 1.000; Valcen: 0.401; Smooth: 0.695 |