Bacterial histone HLp from Leptospira perolatii bound to DNA

entry_id	9qt1
deposition_date	2025-04-07
last_revision	2025-12-24
title	Bacterial histone HLp from Leptospira perolatii bound to DNA
keywords	Bacterial histone, protein-DNA complex, DNA BINDING PROTEIN; DNA BINDING PROTEIN
method	X-RAY DIFFRACTION

rg_guinier	20.59 Å
rg_electron	19.58 Å
i0	14988800.00
molecular_weight	22486.0 kDa
excluded_volume	25258 ų
envelope_volume	33136 ų
shell_volume	15409 ų
envelope_diameter	73.2 Å
shell_rg	24.26 Å
envelope_rg	19.56 Å
shape_rg	19.48 Å
total_rg	20.37 Å
total_atoms	1536
n_residues	146
n_harmonics	20
q_range	— – 0.5000 Å−1
n_points	101
shell_type	directional
solvent_density	0.3340 e/ų
contrast_shell	0.0300 e/ų
crysol_version	4.1.3

dmax	70.0 Å
rg_real	20.65 Å
rg_real_error	0.56 Å
i0_real	1.4990e+07
i0_real_error	2.0220e+05
rg_reciprocal	20.64 Å
i0_reciprocal	14990000.0000
total_estimate	0.7978
solution_quality	GOOD a GOOD solution
n_peaks	3
r_peak_primary	26.4 Å
skewness	0.396
kurtosis	-0.226
angular_range	— – 0.3850 Å−1
current_alpha	0.0000
highest_alpha	1579000.0000
n_real_points	70
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.817; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.916; Smooth: 0.000

Unit Cell

length_a	67.934 Å
length_b	67.934 Å
length_c	97.902 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	16

Symmetry

space_group	P 41 21 2
int_tables_number	92
crystal_system	—

Refinement

resolution	2.100 Å
resolution_low	43.160 Å
r_factor	0.2513
r_work	0.2498
r_free	0.2795

Diffraction

temperature

100.0 K

Files (7)

• pr_distribution /app/data/pr_computation/qt/9qt1/pr_distribution.json
• pr_output /app/data/pr_computation/qt/9qt1/9qt1.pr.out
• pr_plot /app/data/visualization/pr_computation/qt/9qt1/9qt1_pr_distribution.png
• saxs_curve_dat /app/data/saxs_computation/qt/9qt1/9qt1.dat
• saxs_fit /app/data/saxs_computation/qt/9qt1/9qt1.fit
• saxs_log /app/data/saxs_computation/qt/9qt1/9qt1.log
• saxs_plot /app/data/visualization/saxs_computation/qt/9qt1/9qt1_saxs_profile.png

Curves (3)

fit	/app/data/saxs_computation/qt/9qt1/9qt1.fit
pddf	/app/data/pr_computation/qt/9qt1/9qt1.pr.out
profile	/app/data/saxs_computation/qt/9qt1/9qt1.dat