9qum
Structure of lysozyme by continuous serial electron diffraction (SerialED)
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9qum |
| deposition_date | 2025-04-10 |
| last_revision | 2026-04-22 |
| title | Structure of lysozyme by continuous serial electron diffraction (SerialED) |
| keywords | serial electron diffraction, SerialED, lysozyme, Hydrolase; HYDROLASE |
| method | ELECTRON CRYSTALLOGRAPHY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 14.84 Å |
| rg_electron | 13.56 Å |
| i0 | 4755210.00 |
| molecular_weight | 14356.0 kDa |
| excluded_volume | 17383 ų |
| envelope_volume | 18577 ų |
| shell_volume | 11690 ų |
| envelope_diameter | 45.9 Å |
| shell_rg | 19.22 Å |
| envelope_rg | 13.88 Å |
| shape_rg | 13.54 Å |
| total_rg | 14.65 Å |
| total_atoms | 1943 |
| n_residues | 129 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 47.9 Å |
| rg_real | 14.76 Å |
| rg_real_error | 0.31 Å |
| i0_real | 4.7550e+06 |
| i0_real_error | 5.5100e+04 |
| rg_reciprocal | 14.77 Å |
| i0_reciprocal | 4755000.0000 |
| total_estimate | 0.8878 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 19.4 Å |
| skewness | 0.196 |
| kurtosis | -0.309 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 756200.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.853; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 1.000; Smooth: 0.979 |