9r1o
X-ray crystal structure of a de novo designed 1,6-diphenylhexatriene and Nile red binder, sc-apCC-6-DPH-NR
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9r1o |
| deposition_date | 2025-04-27 |
| last_revision | 2026-05-06 |
| title | X-ray crystal structure of a de novo designed 1,6-diphenylhexatriene and Nile red binder, sc-apCC-6-DPH-NR |
| keywords | de novo, coiled-coil, DE NOVO PROTEIN; DE NOVO PROTEIN |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 23.91 Å |
| rg_electron | 22.58 Å |
| i0 | 20655100.00 |
| molecular_weight | 40427.0 kDa |
| excluded_volume | 53184 ų |
| envelope_volume | 63477 ų |
| shell_volume | 23293 ų |
| envelope_diameter | 76.7 Å |
| shell_rg | 29.26 Å |
| envelope_rg | 22.57 Å |
| shape_rg | 22.57 Å |
| total_rg | 23.58 Å |
| total_atoms | 2870 |
| n_residues | 391 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 72.3 Å |
| rg_real | 23.80 Å |
| rg_real_error | 0.46 Å |
| i0_real | 2.0660e+07 |
| i0_real_error | 2.8790e+05 |
| rg_reciprocal | 23.83 Å |
| i0_reciprocal | 20660000.0000 |
| total_estimate | 0.8202 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 3 |
| r_peak_primary | 22.6 Å |
| skewness | 0.148 |
| kurtosis | -0.594 |
| angular_range | — – 0.3300 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 14770000.0000 |
| n_real_points | 65 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.887; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.997; Smooth: 0.000 |