9rsu
NetF pore structure
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9rsu |
| deposition_date | 2025-07-01 |
| title | NetF pore structure |
| keywords | pore forming toxin, hemolysin, clostridium perfringens, transmembrane pore, beta-barrel., TOXIN; TOXIN |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 42.12 Å |
| rg_electron | 41.32 Å |
| i0 | 882655000.00 |
| molecular_weight | 244390.0 kDa |
| excluded_volume | 305740 ų |
| envelope_volume | 456260 ų |
| shell_volume | 88531 ų |
| envelope_diameter | 117.3 Å |
| shell_rg | 50.60 Å |
| envelope_rg | 39.08 Å |
| shape_rg | 41.32 Å |
| total_rg | 41.78 Å |
| total_atoms | 34000 |
| n_residues | 2160 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 118.1 Å |
| rg_real | 41.74 Å |
| rg_real_error | 0.48 Å |
| i0_real | 8.8270e+08 |
| i0_real_error | 1.1770e+07 |
| rg_reciprocal | 42.12 Å |
| i0_reciprocal | 883000000.0000 |
| total_estimate | 0.8908 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 1 |
| r_peak_primary | 60.6 Å |
| skewness | -0.171 |
| kurtosis | -0.630 |
| angular_range | — – 0.1850 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 151100000.0000 |
| n_real_points | 38 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.934; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.966; Smooth: 0.809 |