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9t49

Human Diphosphoinositol Polyphosphate Phosphohydrolase 1 (DIPP1) in complex with 1,5-(PCP)-IP5 (PCP-IP8)

Method: X-RAY DIFFRACTION Dmax: 51.3 Å Quality: GOOD

SAXS Profile

SAXS profile for 9t49

P(r) Distribution

P(r) distribution for 9t49

1. Structure Basics

entry_id9t49
deposition_date2025-10-30
last_revision2026-06-10
titleHuman Diphosphoinositol Polyphosphate Phosphohydrolase 1 (DIPP1) in complex with 1,5-(PCP)-IP5 (PCP-IP8)
keywordsInositol metabolism, phosphatase, NUDIX hydrolases, DIPP1, IP8, HYDROLASE; HYDROLASE
methodX-RAY DIFFRACTION

Download Data

2. SAXS Parameters (CRYSOL)

rg_guinier15.68
rg_electron14.59
i06985260.00
molecular_weight17628.0 kDa
excluded_volume21380 ų
envelope_volume24502 ų
shell_volume13959 ų
envelope_diameter51.5
shell_rg20.72
envelope_rg15.05
shape_rg14.59
total_rg15.69
total_atoms1221
n_residues144
n_harmonics20
q_range— – 0.5000 −1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3

3. P(r) Analysis (GNOM)

dmax51.3
rg_real15.58
rg_real_error0.27
i0_real6.9850e+06
i0_real_error7.8850e+04
rg_reciprocal15.59
i0_reciprocal6985000.0000
total_estimate0.8849
solution_quality GOOD a GOOD solution
n_peaks1
r_peak_primary50.0
skewness0.156
kurtosis-0.393
angular_range— – 0.5000 −1
current_alpha0.0000
highest_alpha1560000.0000
n_real_points80
gnom_version4.1.3
quality_criteria AN1: 0.000; Oscil: 0.834; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 1.000; Smooth: 0.999

4. Crystallography & Experiment

5. Entities & Polymer Info (5)

6. Citations (1)

7. Files & Curves (10)