9v3a
Crystal structure of de novo designed serotonin binder SROb2_26_L7F
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9v3a |
| deposition_date | 2025-05-21 |
| last_revision | 2026-05-27 |
| title | Crystal structure of de novo designed serotonin binder SROb2_26_L7F |
| keywords | small molecule binding complex, de novo protein, serotonin binding protein; DE NOVO PROTEIN |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 15.71 Å |
| rg_electron | 14.25 Å |
| i0 | 3333100.00 |
| molecular_weight | 13628.0 kDa |
| excluded_volume | 17484 ų |
| envelope_volume | 19918 ų |
| shell_volume | 12120 ų |
| envelope_diameter | 51.6 Å |
| shell_rg | 19.82 Å |
| envelope_rg | 14.56 Å |
| shape_rg | 14.20 Å |
| total_rg | 15.65 Å |
| total_atoms | 963 |
| n_residues | 120 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 51.4 Å |
| rg_real | 15.63 Å |
| rg_real_error | 0.34 Å |
| i0_real | 3.3330e+06 |
| i0_real_error | 4.0440e+04 |
| rg_reciprocal | 15.64 Å |
| i0_reciprocal | 3333000.0000 |
| total_estimate | 0.7998 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 46.2 Å |
| skewness | 0.195 |
| kurtosis | -0.273 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 606200.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.798; Stabil: 0.999; Sysdev: 1.000; Positv: 1.000; Valcen: 1.000; Smooth: 0.000 |