← Back to search

9v47

Coupling of polymerase-nucleoprotein-RNA in an influenza virus mini ribonucleoprotein complex

Method: ELECTRON MICROSCOPY D_max: 75.5 Å Quality: GOOD

SAXS Profile

P(r) Distribution

▼

1. Structure Basics

entry_id	9v47
deposition_date	2025-05-22
title	Coupling of polymerase-nucleoprotein-RNA in an influenza virus mini ribonucleoprotein complex
keywords	Influenza virus, ribonucleoprotein complex, polymerase, cryo-EM, VIRAL PROTEIN/RNA, VIRAL PROTEIN-RNA complex; VIRAL PROTEIN/RNA
method	ELECTRON MICROSCOPY

▼

Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

▼

2. SAXS Parameters (CRYSOL)

rg_guinier	24.98 Å
rg_electron	23.93 Å
i0	58474400.00
molecular_weight	54356.0 kDa
excluded_volume	66146 Å³
envelope_volume	88668 Å³
shell_volume	30381 Å³
envelope_diameter	78.2 Å
shell_rg	31.53 Å
envelope_rg	23.80 Å
shape_rg	23.94 Å
total_rg	24.75 Å
total_atoms	3791
n_residues	463
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

▼

3. P(r) Analysis (GNOM)

dmax	75.5 Å
rg_real	24.79 Å
rg_real_error	0.41 Å
i0_real	5.8470e+07
i0_real_error	6.8830e+05
rg_reciprocal	24.84 Å
i0_reciprocal	58480000.0000
total_estimate	0.7558
solution_quality	GOOD a GOOD solution
n_peaks	1
r_peak_primary	74.3 Å
skewness	0.123
kurtosis	-0.521
angular_range	— – 0.3200 Å⁻¹
current_alpha	0.0000
highest_alpha	13490000.0000
n_real_points	64
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.946; Stabil: 1.000; Sysdev: 0.338; Positv: 1.000; Valcen: 0.989; Smooth: 0.981

▶

4. Crystallography & Experiment

▶

5. Entities & Polymer Info (2)

Entity 1 polymer

description	Nucleoprotein
formula_weight	56172.6 kDa
src_method	man
entity_count	1

Polymer

type	polypeptide(L)
strand_id	B
atom_count	3791

MASQGTKRSYEQMETDGERQNATEIRASVGKMINGIGRFYIQMCTELKLSDYEGRLIQNSLTIERMVLSAFDERRNRYLEEHPSAGKDPKKTGGPIYKRVDGKWMRELVLYDKEEIRRIWRQANNGDDATAGLTHMMIWHSNLNDTTYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTMVMELIRMIKRGINDRNFWRGENGRKTRSAYERMCNILKGKFQTAAQRAMMDQVRESRNPGNAEIEDLIFSARSALILRGSVAHKSCLPACVYGPAVASGYDFEKEGYSLVGIDPFKLLQNSQVYSLIRPNENPAHKSQLVWMACHSAAFEDLRLLSFIRGTKVSPRGKLSTRGVQIASNENMDTMESSTLELRSRYWAIRTRSGGNTNQQRASAGQISVQPAFSVQRNLPFDKSTIMAAFTGNTEGRTSDMRAEIIRMMEGAKPEEVSFRGRGVFELSDEKATNPVVPSFDMSNEGSYFFGDNAEEYDN

Source

organism	Influenza A virus (A/Victoria/3/1975(H3N2))
ncbi_taxonomy_id	392809
host_organism	Homo sapiens

Entity 2 polymer

description	;RNA (5'-R(PAPAPAPAPAPAPAPAPAPA)-3') ;
formula_weight	3247.1 kDa
src_method	man
entity_count	1

Polymer

type	polyribonucleotide
strand_id	C

AAAAAAAAAA

Source

organism	Influenza A virus (A/Victoria/3/1975(H3N2))
ncbi_taxonomy_id	392809
host_organism	Homo sapiens

▶

6. Citations (1)

▶

resolution	4.52 Å
resolution_method	—
num_particles	265200

fit	/app/data/saxs_computation/v4/9v47/9v47.fit
pddf	/app/data/pr_computation/v4/9v47/9v47.pr.out
profile	/app/data/saxs_computation/v4/9v47/9v47.dat

Coupling of polymerase-nucleoprotein-RNA in an influenza virus mini ribonucleoprotein complex

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

EM 3D

5. Entities & Polymer Info (2)

Entity 1 polymer

Polymer

Source

Entity 2 polymer

Polymer

Source

6. Citations (1)

7. Files & Curves (10)

Files (7)

Curves (3)