9v88
Crystal structure of d(CGTTAACG)2 with a four-carbon linker containing quinoxaline-acridine asymmetric intercalator compound
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9v88 |
| deposition_date | 2025-05-29 |
| title | Crystal structure of d(CGTTAACG)2 with a four-carbon linker containing quinoxaline-acridine asymmetric intercalator compound |
| keywords | Ligand-DNA complex, Asymmetric intercalator, Bis-intercalation, Quinoxaline, Acridine, DNA; DNA |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 12.35 Å |
| rg_electron | 11.58 Å |
| i0 | 2025890.00 |
| molecular_weight | 5296.0 kDa |
| excluded_volume | 4307 ų |
| envelope_volume | 7699 ų |
| shell_volume | 6308 ų |
| envelope_diameter | 41.1 Å |
| shell_rg | 15.89 Å |
| envelope_rg | 11.98 Å |
| shape_rg | 11.42 Å |
| total_rg | 12.51 Å |
| total_atoms | 369 |
| n_residues | 16 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 44.0 Å |
| rg_real | 12.37 Å |
| rg_real_error | 0.44 Å |
| i0_real | 2.0260e+06 |
| i0_real_error | 2.1890e+04 |
| rg_reciprocal | 12.37 Å |
| i0_reciprocal | 2026000.0000 |
| total_estimate | 0.8495 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 15.0 Å |
| skewness | 0.391 |
| kurtosis | -0.101 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 92790.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.717; Stabil: 0.999; Sysdev: 1.000; Positv: 1.000; Valcen: 0.904; Smooth: 0.987 |