9v9a
Crystal structure of the periplasmic domain of CadF from Campylobacter jejuni in complex with glycine
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9v9a |
| deposition_date | 2025-05-30 |
| last_revision | 2026-05-06 |
| title | Crystal structure of the periplasmic domain of CadF from Campylobacter jejuni in complex with glycine |
| keywords | CadF, Campylobacter jejuni, peptidoglycan, PEPTIDE BINDING PROTEIN; PEPTIDE BINDING PROTEIN |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 19.83 Å |
| rg_electron | 18.98 Å |
| i0 | 13296600.00 |
| molecular_weight | 25533.0 kDa |
| excluded_volume | 31169 ų |
| envelope_volume | 37485 ų |
| shell_volume | 16863 ų |
| envelope_diameter | 60.8 Å |
| shell_rg | 24.55 Å |
| envelope_rg | 18.85 Å |
| shape_rg | 18.96 Å |
| total_rg | 19.80 Å |
| total_atoms | 1797 |
| n_residues | 226 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 66.3 Å |
| rg_real | 19.73 Å |
| rg_real_error | 0.41 Å |
| i0_real | 1.3300e+07 |
| i0_real_error | 1.7280e+05 |
| rg_reciprocal | 19.75 Å |
| i0_reciprocal | 13300000.0000 |
| total_estimate | 0.8132 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 27.1 Å |
| skewness | 0.098 |
| kurtosis | -0.678 |
| angular_range | — – 0.4000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 2853000.0000 |
| n_real_points | 72 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.870; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.956; Smooth: 0.000 |