9vg5
NMR Solution Structure of the Monomeric Catalytic C-terminal Lobe of the E6AP HECT E3 Ubiquitin Ligase
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9vg5 |
| deposition_date | 2025-06-12 |
| last_revision | 2025-06-25 |
| title | NMR Solution Structure of the Monomeric Catalytic C-terminal Lobe of the E6AP HECT E3 Ubiquitin Ligase |
| keywords | HECT ligase, E6AP, E3 ligase, C-lobe, LIGASE; LIGASE |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 13.95 Å |
| rg_electron | 13.55 Å |
| i0 | 904800000.00 |
| molecular_weight | 263120.0 kDa |
| excluded_volume | 332550 ų |
| envelope_volume | 30452 ų |
| shell_volume | 15837 ų |
| envelope_diameter | 51.2 Å |
| shell_rg | 22.27 Å |
| envelope_rg | 16.50 Å |
| shape_rg | 13.50 Å |
| total_rg | 13.87 Å |
| total_atoms | 37280 |
| n_residues | 2320 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 48.7 Å |
| rg_real | 13.84 Å |
| rg_real_error | 0.41 Å |
| i0_real | 9.0480e+08 |
| i0_real_error | 1.0950e+07 |
| rg_reciprocal | 13.85 Å |
| i0_reciprocal | 904800000.0000 |
| total_estimate | 0.8372 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 19.1 Å |
| skewness | 0.060 |
| kurtosis | -0.268 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 372800.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.627; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 1.000; Smooth: 0.998 |