9xzp
Crystal structure of AI-designed homodimer MIYEI
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9xzp |
| deposition_date | 2025-08-27 |
| title | Crystal structure of AI-designed homodimer MIYEI |
| keywords | De novo protein MIYEI, DE NOVO PROTEIN; DE NOVO PROTEIN |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 16.59 Å |
| rg_electron | 15.29 Å |
| i0 | 4921530.00 |
| molecular_weight | 15949.0 kDa |
| excluded_volume | 20121 ų |
| envelope_volume | 23864 ų |
| shell_volume | 13451 ų |
| envelope_diameter | 58.3 Å |
| shell_rg | 20.79 Å |
| envelope_rg | 15.62 Å |
| shape_rg | 15.31 Å |
| total_rg | 16.37 Å |
| total_atoms | 1120 |
| n_residues | 155 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 59.8 Å |
| rg_real | 16.50 Å |
| rg_real_error | 0.53 Å |
| i0_real | 4.9220e+06 |
| i0_real_error | 5.8980e+04 |
| rg_reciprocal | 16.51 Å |
| i0_reciprocal | 4922000.0000 |
| total_estimate | 0.8320 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 21.8 Å |
| skewness | 0.230 |
| kurtosis | -0.157 |
| angular_range | — – 0.4800 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 1145000.0000 |
| n_real_points | 78 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.612; Stabil: 0.998; Sysdev: 1.000; Positv: 1.000; Valcen: 0.986; Smooth: 0.997 |