9y0i
Crystal structure of designed switching homodimer CSD20f3A
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9y0i |
| deposition_date | 2025-08-28 |
| last_revision | 2025-09-10 |
| title | Crystal structure of designed switching homodimer CSD20f3A |
| keywords | de novo protein, design model, Effector, kinetics and dynamics, Protein-protein interactions; DE NOVO PROTEIN |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 25.87 Å |
| rg_electron | 24.68 Å |
| i0 | 88107600.00 |
| molecular_weight | 69886.0 kDa |
| excluded_volume | 86508 ų |
| envelope_volume | 105380 ų |
| shell_volume | 34204 ų |
| envelope_diameter | 81.3 Å |
| shell_rg | 33.11 Å |
| envelope_rg | 24.78 Å |
| shape_rg | 24.67 Å |
| total_rg | 25.57 Å |
| total_atoms | 4910 |
| n_residues | 655 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 79.0 Å |
| rg_real | 25.73 Å |
| rg_real_error | 0.41 Å |
| i0_real | 8.8110e+07 |
| i0_real_error | 1.2200e+06 |
| rg_reciprocal | 25.78 Å |
| i0_reciprocal | 88110000.0000 |
| total_estimate | 0.9038 |
| solution_quality | EXCELLENT a EXCELLENT solution |
| n_peaks | 1 |
| r_peak_primary | 77.7 Å |
| skewness | 0.190 |
| kurtosis | -0.450 |
| angular_range | — – 0.3050 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 20840000.0000 |
| n_real_points | 62 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.927; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.985; Smooth: 0.981 |