9ytq
Computationally Designed Tetramer of Apo-HC4 (C1 symmetry)
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9ytq |
| deposition_date | 2025-10-21 |
| title | Computationally Designed Tetramer of Apo-HC4 (C1 symmetry) |
| keywords | Tetramer, computationally designed protein, DE NOVO PROTEIN; DE NOVO PROTEIN |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 29.07 Å |
| rg_electron | 27.88 Å |
| i0 | 59874500.00 |
| molecular_weight | 64819.0 kDa |
| excluded_volume | 83048 ų |
| envelope_volume | 107240 ų |
| shell_volume | 32875 ų |
| envelope_diameter | 97.1 Å |
| shell_rg | 34.28 Å |
| envelope_rg | 28.14 Å |
| shape_rg | 27.85 Å |
| total_rg | 28.68 Å |
| total_atoms | 4596 |
| n_residues | 552 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 95.2 Å |
| rg_real | 29.03 Å |
| rg_real_error | 0.71 Å |
| i0_real | 5.9870e+07 |
| i0_real_error | 9.0620e+05 |
| rg_reciprocal | 29.05 Å |
| i0_reciprocal | 59880000.0000 |
| total_estimate | 0.8919 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 1 |
| r_peak_primary | 36.3 Å |
| skewness | 0.281 |
| kurtosis | -0.321 |
| angular_range | — – 0.2750 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 10530000.0000 |
| n_real_points | 56 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.889; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.991; Smooth: 0.933 |