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9zcb

1-methyl-pseudouridine twist corrected RNA origami 6-helix bundle type-1 dimer

Method: ELECTRON MICROSCOPY Dmax: 226.5 Å Quality: GOOD

SAXS Profile

SAXS profile for 9zcb

P(r) Distribution

P(r) distribution for 9zcb
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1. Structure Basics

entry_id9zcb
deposition_date2025-11-22
title1-methyl-pseudouridine twist corrected RNA origami 6-helix bundle type-1 dimer
keywordsRNA, homodimer, 1-methyl-pseudouridine; RNA
methodELECTRON MICROSCOPY
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Download Data

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2. SAXS Parameters (CRYSOL)

rg_guinier88.07 Å
rg_electron88.50 Å
i09520570000.00
molecular_weight477040.0 kDa
excluded_volume449990 ų
envelope_volume1133900 ų
shell_volume111520 ų
envelope_diameter313.5 Å
shell_rg85.61 Å
envelope_rg81.56 Å
shape_rg88.46 Å
total_rg88.55 Å
total_atoms31464
n_residues1106
n_harmonics20
q_range— – 0.5000 Å−1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3
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3. P(r) Analysis (GNOM)

dmax226.5 Å
rg_real84.15 Å
rg_real_error0.75 Å
i0_real9.0950e+09
i0_real_error1.7050e+08
rg_reciprocal86.28 Å
i0_reciprocal9467000000.0000
total_estimate0.8950
solution_quality GOOD a GOOD solution
n_peaks1
r_peak_primary75.5 Å
skewness0.140
kurtosis-0.875
angular_range— – 0.0900 Å−1
current_alpha0.9311
highest_alpha182100000.0000
n_real_points19
gnom_version4.1.3
quality_criteria AN1: 0.000; Oscil: 0.996; Stabil: 0.973; Sysdev: 1.000; Positv: 1.000; Valcen: 0.731; Smooth: 0.000
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4. Crystallography & Experiment

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5. Entities & Polymer Info (1)

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6. Citations (1)

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7. Files & Curves (10)