9zog
Crystal structure of nucleoside-diphosphate kinase Cryptosporidium parvum (Apo, hexamer)
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9zog |
| deposition_date | 2025-12-15 |
| last_revision | 2025-12-24 |
| title | Crystal structure of nucleoside-diphosphate kinase Cryptosporidium parvum (Apo, hexamer) |
| keywords | SSGCID, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, TRANSFERASE, nucleoside-diphosphate kinase; TRANSFERASE |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 28.35 Å |
| rg_electron | 27.30 Å |
| i0 | 160073000.00 |
| molecular_weight | 101520.0 kDa |
| excluded_volume | 127740 ų |
| envelope_volume | 150990 ų |
| shell_volume | 43615 ų |
| envelope_diameter | 94.0 Å |
| shell_rg | 36.75 Å |
| envelope_rg | 27.49 Å |
| shape_rg | 27.32 Å |
| total_rg | 28.12 Å |
| total_atoms | 7119 |
| n_residues | 902 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 90.1 Å |
| rg_real | 28.09 Å |
| rg_real_error | 0.45 Å |
| i0_real | 1.6010e+08 |
| i0_real_error | 2.4400e+06 |
| rg_reciprocal | 28.17 Å |
| i0_reciprocal | 160100000.0000 |
| total_estimate | 0.8866 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 38.6 Å |
| skewness | 0.060 |
| kurtosis | -0.494 |
| angular_range | — – 0.2800 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 62770000.0000 |
| n_real_points | 57 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.847; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.984; Smooth: 0.996 |