{ "code": "SASDWF2", "status": "Published", "type_of_curve": "Single concentration", "angular_unit": "1/A", "project": { "title": "Tangled Up in Fibers: How a Multidomain Lytic Polysaccharide Monooxygenase Binds Its Chitin Substrate.", "publication": { "title": "Tangled Up in Fibers: How a Multidomain Lytic Polysaccharide Monooxygenase Binds Its Chitin Substrate.", "author_list": "Sørensen HV, Montserrat-Canals M, Coder A, Prévost S, Krueger S, Vaaje-Kolstad G, Bjerregaard-Andersen K, Lund R, Krengel U", "journal": "ACS Appl Mater Interfaces", "doi": "10.1021/acsami.5c24418", "pmid": "41709583", "published_date": "2026 Feb 18" }, "status": "released", "submitted_date": "2024-11-19", "released_date": "2025-02-09" }, "pddf_data": null, "intensities_data": "https://www.sasbdb.org/media/intensities_files/SASDWF2.dat", "intensities_log_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDWF2_dat_img.png", "intensities_kratky_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDWF2_kratky_img.png", "pddf_plot": null, "intensities_guinier_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDWF2_guinier_img.png", "sascif_data": "https://www.sasbdb.org/media/sascif/sascif_files/SASDWF2.sascif", "experiment": { "instrument": { "detector": { "type": "3-He gas detector", "name": "CERCA", "resolution": 7.5 }, "name": "ILL", "city": "Grenoble", "country": "France", "beamline_name": "D11", "beam_geometry": null, "type_of_source": "neutron source", "point_source": null, "line_collimation": null, "sample_path_length": null, "line_collimation_slitlength": null, "line_collimation_integrationwidth": null, "xray_energy": null, "beam_profile_ah": null, "beam_profile_al": null }, "sample": { "molecule": [ { "long_name": "β-chitin nanofibers from squid pens", "short_name": "β-chitin", "sequence": "(C8H13O5N)n", "organism": "Squid", "uniprot_code": null, "uniprot_range_first": null, "uniprot_range_last": null, "oligomerization": null, "molecular_type": "other", "uniprot_sequence": "", "mw": 0.203, "total_mw": 0.0, "number_molecules": 0, "complex_state": false, "deuteration": null, "molecule_source": "biological", "molecule_description": "This is a carbohydrate polymer of varying size. Number of molecules and total kDa are not applicable." }, { "long_name": "GlcNAc-binding protein A (perdeuterated)", "short_name": "D-GbpA", "sequence": "HGYVSAVENGVAEGRVTLCKFAANGTGEKNTHCGAIQYEPQSVEGPDGFPVTGPRDGKIASAESALAAALDEQTADRWVKRPIQAGPQTFEWTFTANHVTKDWKYYITKPNWNPNQPLSRDAFDLNPFCVVEGNMVQPPKRVSHECIVPEREGYQVILAVWDVGDTAASFYNVIDVKFDGNGPVLPDWNPAGQIIPSMDLSIGDTVYTRVFDNDGENPAYRTELKIDSETLTKANQWSYALATKINQTQKQQRAGQLNGDQFVPVYGTNPIYLKEGSGLKSVEIGYQIEAPQPEYSLTVSGLAKEYEIGEQPIQLDLTLEAQGEMSAELTVYNHHQKPLASWSQAMTDGELKSITLELSEAKAGHHMLVSRIKDRDGNLQDQQTLDFMLVEPQTPPTPGDYDFVFPNGLKEYVAGTKVLASDGAIYQCKPWPYSGYCQQWTSNATQYQPGTGSHWEMAWDKR", "organism": "Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)", "uniprot_code": "Q9KLD5", "uniprot_range_first": 24, "uniprot_range_last": 485, "oligomerization": "monomer", "molecular_type": "protein", "uniprot_sequence": "MKKQPKMTAIALILSGISGLAYGHGYVSAVENGVAEGRVTLCKFAANGTGEKNTHCGAIQ\nYEPQSVEGPDGFPVTGPRDGKIASAESALAAALDEQTADRWVKRPIQAGPQTFEWTFTAN\nHVTKDWKYYITKPNWNPNQPLSRDAFDLNPFCVVEGNMVQPPKRVSHECIVPEREGYQVI\nLAVWDVGDTAASFYNVIDVKFDGNGPVLPDWNPAGQIIPSMDLSIGDTVYTRVFDNDGEN\nPAYRTELKIDSETLTKANQWSYALATKINQTQKQQRAGQLNGDQFVPVYGTNPIYLKEGS\nGLKSVEIGYQIEAPQPEYSLTVSGLAKEYEIGEQPIQLDLTLEAQGEMSAELTVYNHHQK\nPLASWSQAMTDGELKSITLELSEAKAGHHMLVSRIKDRDGNLQDQQTLDFMLVEPQTPPT\nPGDYDFVFPNGLKEYVAGTKVLASDGAIYQCKPWPYSGYCQQWTSNATQYQPGTGSHWEM\nAWDKR", "mw": 51.253, "total_mw": 51.253, "number_molecules": 1, "complex_state": false, "deuteration": null, "molecule_source": "biological", "molecule_description": "97 % average non-exchangeable deuteration through production in E.coli cultures grown in D₂O and deuterated carbon sources." } ], "buffer": { "name": "20 mM acetate, 47% v/v D₂O", "concentration_unit": null, "comment": null, "additive": null, "concentration": null, "pka": null, "ph": 5.0, "deuteration": null }, "purity_method": null, "name": "0.48 mg/mL β-chitin nanofibers from squid pens with 1.2 mg/mL perdeuterated N-acetylglucosamine binding Protein A (D-GbpA) in 47 % D₂O", "ext_coefficient": null, "contrast": null, "specific_vol": null, "dry_vol": null, "absorbption": null, "deuteration": null, "mixture": null }, "contributor": [ { "affiliation": [ { "short_name": null, "address": null, "full_name": "Lund University", "webpage": null } ], "contributor_name": "Henrik Vinther", "contributor_surname": "Sørensen", "orcid": "https://orcid.org/0000-0003-3057-5668" } ], "concentration_method": null, "concentration_unit": null, "date": "2019-09-21", "storage_temperature": 5.0, "cell_temperature": 25.0, "exposure_time": 1500.0, "number_of_frames": 1, "wavelength": 0.56, "sample_detector_distance": 1.7, "concentration_min": null, "concentration_max": 1.2, "sample_volume": null, "flow_rate": null, "s_min": 0.016, "s_max": 4.089, "total_exposure_time": null, "seccolumn": null }, "fits": [], "estimated_volume_method": null, "pddf_software": null, "pddf_software_version": null, "i0_calibration_standard": null, "description": "Guinier analysis and subsequent Rg, I(0) and MW parameters are not applicable for this entry as the Guinier-region occurs at a much lower s-range than the data includes. The chitin fibers are micrometers long.", "experiment_description": "SANS data from solutions of β-chitin nanofibers from squid pens mixed with perdeuterated N-acetylglucosamine binding Protein A (D-GbpA) in 20 mM acetate, 47% v/v D₂O, pH 5 were collected on the D11 beam line at the Institut Laue-Langevin (ILL; Grenoble, France). Data recorded as I(s) vs s (where s = 4πsinθ/λ, and 2θ is the scattering angle), were collected a sample concentration of 0.48 mg/mL chitin and 1.2 mg/mL D-GbpA at 25 degrees centigrade using three instrument configurations: Set-up 1: Sample-Detector distance, 1.7 m; Collimation distance, 5.5 m; Wavelength, 0.56 nm; Frames, 1; Time per frame, 1500 s. Set-up 2: Sample-Detector distance, 8.0 m; Collimation distance, 8.0 m; Wavelength, 0.56 nm; Frames, 1; Time per frame, 1500 s. Set-up 3: Sample-Detector distance, 38.95 m; Collimation distance, 40.0 m; Wavelength, 0.56 nm; Frames, 1; Time per frame, 2100 s.", "tags": [], "intensity_unit": "1/cm", "experimental_mw": null, "experimental_mw_error": null, "guinier_i0_mw": null, "guinier_i0_mw_error": null, "porod_mw": null, "porod_mw_error": null, "pddf_i0": null, "pddf_i0_error": null, "guinier_i0": null, "guinier_i0_error": null, "pddf_rg": null, "pddf_rg_error": null, "guinier_rg": null, "guinier_rg_error": null, "pddf_dmax": null, "pddf_dmax_error": null, "porod_volume": null, "porod_volume_error": null, "estimated_volume": null, "estimated_volume_error": null, "guinier_point_first": 1, "guinier_point_last": 100, "pddf_point_first": null, "pddf_point_last": null, "i0_calibration_standard_data": null, "intensities_log_log_plot": "SASDWF2_datloglog_img.png", "symmetry": null, "last_modified": "2026-02-23T16:32:02.386485+01:00", "bragg_peak": [] }