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101d

REFINEMENT OF NETROPSIN BOUND TO DNA: BIAS AND FEEDBACK IN ELECTRON DENSITY MAP INTERPRETATION

Method: X-RAY DIFFRACTION Dmax: 46.8 Å Quality: GOOD

SAXS Profile

SAXS profile for 101d

P(r) Distribution

P(r) distribution for 101d

1. Structure Basics

entry_id101d
deposition_date1994-12-14
titleREFINEMENT OF NETROPSIN BOUND TO DNA: BIAS AND FEEDBACK IN ELECTRON DENSITY MAP INTERPRETATION
keywordsB-DNA, DOUBLE HELIX, COMPLEXED WITH DRUG, MODIFIED, DNA; DNA
methodX-RAY DIFFRACTION

Download Data

2. SAXS Parameters (CRYSOL)

rg_guinier13.41
rg_electron12.94
i03207770.00
molecular_weight7926.0 kDa
excluded_volume7617 ų
envelope_volume9936 ų
shell_volume7282 ų
envelope_diameter46.5
shell_rg17.11
envelope_rg13.38
shape_rg12.86
total_rg13.65
total_atoms520
n_residues22
n_harmonics20
q_range— – 0.5000 −1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3

3. P(r) Analysis (GNOM)

dmax46.8
rg_real13.50
rg_real_error0.44
i0_real3.2080e+06
i0_real_error3.7560e+04
rg_reciprocal13.49
i0_reciprocal3208000.0000
total_estimate0.8363
solution_quality GOOD a GOOD solution
n_peaks2
r_peak_primary14.2
skewness0.495
kurtosis-0.237
angular_range— – 0.5000 −1
current_alpha0.0000
highest_alpha276200.0000
n_real_points80
gnom_version4.1.3
quality_criteria AN1: 0.000; Oscil: 0.741; Stabil: 0.998; Sysdev: 1.000; Positv: 1.000; Valcen: 0.768; Smooth: 0.885

4. Crystallography & Experiment

5. Entities & Polymer Info (4)

6. Citations (2)

7. Files & Curves (15)