103d
THE UNUSUAL STRUCTURE OF THE HUMAN CENTROMERE (GGA)2 MOTIF: UNPAIRED GUANOSINE RESIDUES STACKED BETWEEN SHEARED G(DOT)A PAIRS
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 103d |
| deposition_date | 1994-12-16 |
| title | THE UNUSUAL STRUCTURE OF THE HUMAN CENTROMERE (GGA)2 MOTIF: UNPAIRED GUANOSINE RESIDUES STACKED BETWEEN SHEARED G(DOT)A PAIRS |
| keywords | DNA, DOUBLE HELIX, G-G STACKING, G:A MISMATCH, HUMAN CENTROMERE REPEAT, GA-BRACKETED G-STACK MOTIF; DNA |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 14.68 Å |
| rg_electron | 14.62 Å |
| i0 | 2912030.00 |
| molecular_weight | 7489.0 kDa |
| excluded_volume | 7162 ų |
| envelope_volume | 9686 ų |
| shell_volume | 6555 ų |
| envelope_diameter | 51.1 Å |
| shell_rg | 17.92 Å |
| envelope_rg | 15.00 Å |
| shape_rg | 14.56 Å |
| total_rg | 15.16 Å |
| total_atoms | 772 |
| n_residues | 24 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 51.2 Å |
| rg_real | 14.86 Å |
| rg_real_error | 0.43 Å |
| i0_real | 2.9120e+06 |
| i0_real_error | 3.3970e+04 |
| rg_reciprocal | 14.85 Å |
| i0_reciprocal | 2912000.0000 |
| total_estimate | 0.8113 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 12.9 Å |
| skewness | 0.526 |
| kurtosis | -0.396 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 179800.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.741; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.379; Smooth: 0.942 |