[3T-17,17,7-17N] Isosceles tensegrity triangle with 17, 17 and 7 base pairs between junctions and three turn edges

entry_id	10he
deposition_date	2026-01-19
last_revision	2026-03-25
title	[3T-17,17,7-17N] Isosceles tensegrity triangle with 17, 17 and 7 base pairs between junctions and three turn edges
keywords	Tensegrity triangle, DNA; DNA
method	X-RAY DIFFRACTION

rg_guinier	36.36 Å
rg_electron	36.42 Å
i0	139551000.00
molecular_weight	57206.0 kDa
excluded_volume	55310 ų
envelope_volume	107630 ų
shell_volume	26681 ų
envelope_diameter	125.5 Å
shell_rg	38.92 Å
envelope_rg	35.79 Å
shape_rg	36.40 Å
total_rg	36.58 Å
total_atoms	3792
n_residues	186
n_harmonics	20
q_range	— – 0.5000 Å−1
n_points	101
shell_type	directional
solvent_density	0.3340 e/ų
contrast_shell	0.0300 e/ų
crysol_version	4.1.3

dmax	120.1 Å
rg_real	36.47 Å
rg_real_error	1.29 Å
i0_real	1.3960e+08
i0_real_error	2.0980e+06
rg_reciprocal	36.41 Å
i0_reciprocal	139500000.0000
total_estimate	0.8985
solution_quality	GOOD a GOOD solution
n_peaks	2
r_peak_primary	35.5 Å
skewness	0.250
kurtosis	-0.688
angular_range	— – 0.2200 Å−1
current_alpha	0.0000
highest_alpha	3115000.0000
n_real_points	45
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.943; Stabil: 0.999; Sysdev: 1.000; Positv: 1.000; Valcen: 0.890; Smooth: 0.960

Unit Cell

length_a	89.131 Å
length_b	99.497 Å
length_c	100.040 Å
angle_alpha	84.24 °
angle_beta	64.20 °
angle_gamma	67.55 °
z_pdb	1

Symmetry

space_group	P 1
int_tables_number	1
crystal_system	triclinic

Refinement

resolution	6.330 Å
resolution_low	46.370 Å
r_factor	0.2171
r_work	0.2154
r_free	0.2667

Diffraction

temperature

100.0 K

Files (7)

• pr_distribution /app/data/pr_computation/0h/10he/pr_distribution.json
• pr_output /app/data/pr_computation/0h/10he/10he.pr.out
• pr_plot /app/data/visualization/pr_computation/0h/10he/10he_pr_distribution.png
• saxs_curve_dat /app/data/saxs_computation/0h/10he/10he.dat
• saxs_fit /app/data/saxs_computation/0h/10he/10he.fit
• saxs_log /app/data/saxs_computation/0h/10he/10he.log
• saxs_plot /app/data/visualization/saxs_computation/0h/10he/10he_saxs_profile.png

Curves (3)

fit	/app/data/saxs_computation/0h/10he/10he.fit
pddf	/app/data/pr_computation/0h/10he/10he.pr.out
profile	/app/data/saxs_computation/0h/10he/10he.dat