10yv

Structure of a putative GH97 from Cellulomonas fimi

Method: X-RAY DIFFRACTION Dmax: 79.9 Å Quality: GOOD

1. Protein Identity and Related Structures Protein Identity & Related Structures

Putative GH97 from Cellulomonas fimi

Cellulomonas fimi

UniProt F4H4S0

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein homooligomer Homooligomer Protein × 2 PDB declaration: dimeric(2) Consistent with protein copy count Chain A; UniProt 73–347 Chain B; UniProt 73–347 Non-standard monomer:Yes (specific site not provided by mmCIF) CD CADMIUM ION × 10 CA CALCIUM ION × 8 K POTASSIUM ION × 2 CL CHLORIDE ION × 5 X-RAY DIFFRACTION X-ray crystallization conditions:VAPOR DIFFUSION, SITTING DROP;293.15 K;0.1 M Cadmium chloride hydrate, 0.1 M Sodium acetate trihydrate pH 4.6 and 30% v/v Polyethylene glycol 400 Resolution 2.15 Å R-free 0.236

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name F4H4S0_CELFA
Isoform
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–275; UniProt 73–347 Author chain B; PDBConstruct 1–275; UniProt 73–347

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

SAXS scattering curve SAXS Profile

SAXS profile for 10yv

P(r) Distance Distribution P(r) Distribution

P(r) distribution for 10yv
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2. Structure Basics 2. Structure Basics

Entry ID entry_id10yv
Deposition date deposition_date2026-02-12
最后修订 last_revision2026-05-06
Structure title titleStructure of a putative GH97 from Cellulomonas fimi
Keywords keywordshypothetical protein, UNKNOWN FUNCTION; UNKNOWN FUNCTION
Experimental Method methodX-RAY DIFFRACTION

3. SAXS Parameters (CRYSOL theoretical calculation) 3. SAXS Parameters (CRYSOL)

Radius of gyration Rg (Guinier) rg_guinier24.77
Radius of gyration Rg (electron density) rg_electron23.79
Forward intensity I(0) i061205700.00
Molecular weight molecular_weight59396.0 kDa
Excluded volume excluded_volume73020 ų
Envelope volume envelope_volume83124 ų
Hydration-shell volume shell_volume29062 ų
Envelope diameter envelope_diameter80.4
Shell Rg shell_rg31.35
Envelope Rg envelope_rg23.78
Shape Rg shape_rg23.76
Total Rg total_rg24.65
Total atoms total_atoms4109
Residues n_residues548
Spherical-harmonic order n_harmonics20
q range q_range— – 0.5000 −1
Data points n_points101
Shell type shell_typedirectional
Solvent electron density solvent_density0.3340 e/ų
Shell contrast contrast_shell0.0300 e/ų
CRYSOL version crysol_version4.1.3

4. P(r) Distance Distribution (GNOM inversion) 4. P(r) Analysis (GNOM)

Maximum dimension Dmax dmax79.9
Rg (real space) rg_real24.72
Rg uncertainty (real space) rg_real_error0.39
I(0) (real space) i0_real6.1210e+07
I(0) uncertainty (real space) i0_real_error8.0710e+05
Rg (reciprocal space) rg_reciprocal24.73
I(0) (reciprocal space) i0_reciprocal61210000.0000
Solution quality estimate total_estimate0.8900
Solution quality rating solution_quality GOOD a GOOD solution
P(r) peaks n_peaks2
Primary peak position r_peak_primary29.2
Skewness Skewness skewness0.345
Kurtosis Kurtosis kurtosis-0.302
Angular range angular_range— – 0.3200 −1
Current regularization parameter α current_alpha0.0000
Highest regularization parameter α highest_alpha12030000.0000
Real-space data points n_real_points64
GNOM version gnom_version4.1.3
Quality Criteria quality_criteria AN1: 0.000; Oscil: 0.862; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.997; Smooth: 0.984

5. Crystallography and Experiment 5. Crystallography & Experiment

6. Entities and Polymers Entities & Polymers (6)

8. Citations (1)

9. Files and Curves (10)