121d
MOLECULAR STRUCTURE OF THE A-TRACT DNA DODECAMER D(CGCAAATTTGCG) COMPLEXED WITH THE MINOR GROOVE BINDING DRUG NETROPSIN
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 121d |
| deposition_date | 1993-04-14 |
| title | MOLECULAR STRUCTURE OF THE A-TRACT DNA DODECAMER D(CGCAAATTTGCG) COMPLEXED WITH THE MINOR GROOVE BINDING DRUG NETROPSIN |
| keywords | B-DNA, DOUBLE HELIX, COMPLEXED WITH DRUG, DNA; DNA |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 13.57 Å |
| rg_electron | 13.04 Å |
| i0 | 2943610.00 |
| molecular_weight | 7741.0 kDa |
| excluded_volume | 7591 ų |
| envelope_volume | 9940 ų |
| shell_volume | 7283 ų |
| envelope_diameter | 46.5 Å |
| shell_rg | 17.18 Å |
| envelope_rg | 13.38 Å |
| shape_rg | 12.93 Å |
| total_rg | 13.80 Å |
| total_atoms | 517 |
| n_residues | 24 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 46.8 Å |
| rg_real | 13.64 Å |
| rg_real_error | 0.33 Å |
| i0_real | 2.9440e+06 |
| i0_real_error | 3.1970e+04 |
| rg_reciprocal | 13.64 Å |
| i0_reciprocal | 2944000.0000 |
| total_estimate | 0.8595 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 14.2 Å |
| skewness | 0.471 |
| kurtosis | -0.262 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 203200.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.800; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.798; Smooth: 0.971 |