122d
DNA HELIX STRUCTURE AND REFINEMENT ALGORITHM: COMPARISON OF MODELS FOR D(CCAGGCM==5==CTGG) DERIVED FROM NUCLSQ, TNT, AND X-PLOR
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 122d |
| deposition_date | 1993-05-03 |
| title | DNA HELIX STRUCTURE AND REFINEMENT ALGORITHM: COMPARISON OF MODELS FOR D(CCAGGCM==5==CTGG) DERIVED FROM NUCLSQ, TNT, AND X-PLOR |
| keywords | B-DNA, DOUBLE HELIX, MODIFIED, DNA; DNA |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 12.43 Å |
| rg_electron | 11.84 Å |
| i0 | 2005870.00 |
| molecular_weight | 6102.0 kDa |
| excluded_volume | 5910 ų |
| envelope_volume | 7796 ų |
| shell_volume | 6342 ų |
| envelope_diameter | 40.0 Å |
| shell_rg | 15.85 Å |
| envelope_rg | 12.02 Å |
| shape_rg | 11.72 Å |
| total_rg | 12.69 Å |
| total_atoms | 406 |
| n_residues | 18 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 42.1 Å |
| rg_real | 12.46 Å |
| rg_real_error | 0.36 Å |
| i0_real | 2.0060e+06 |
| i0_real_error | 2.3690e+04 |
| rg_reciprocal | 12.46 Å |
| i0_reciprocal | 2006000.0000 |
| total_estimate | 0.8686 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 13.9 Å |
| skewness | 0.390 |
| kurtosis | -0.301 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 111200.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.797; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.931; Smooth: 0.966 |