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12ze

CryoEM structure of Papaya Meleira Virus (PMeV) particles purified directly from Carica papaya latex

Method: ELECTRON MICROSCOPY D_max: 154.7 Å Quality: GOOD

SAXS Profile

P(r) Distribution

P(r) distribution for 12ze

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1. Structure Basics

entry_id	12ze
deposition_date	2026-04-23
title	CryoEM structure of Papaya Meleira Virus (PMeV) particles purified directly from Carica papaya latex
keywords	Papaya sticky disease, Double-stranded RNA viruses, Quasiequivalent conformation, Icosahedral capsid, VIRUS; VIRUS
method	ELECTRON MICROSCOPY

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	44.89 Å
rg_electron	44.81 Å
i0	463277000.00
molecular_weight	177910.0 kDa
excluded_volume	222840 Å³
envelope_volume	316700 Å³
shell_volume	60732 Å³
envelope_diameter	162.7 Å
shell_rg	47.11 Å
envelope_rg	44.70 Å
shape_rg	44.83 Å
total_rg	44.87 Å
total_atoms	12559
n_residues	1551
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	154.7 Å
rg_real	45.12 Å
rg_real_error	1.59 Å
i0_real	4.6330e+08
i0_real_error	7.7230e+06
rg_reciprocal	44.89 Å
i0_reciprocal	463200000.0000
total_estimate	0.8528
solution_quality	GOOD a GOOD solution
n_peaks	1
r_peak_primary	44.2 Å
skewness	0.422
kurtosis	-0.445
angular_range	— – 0.1750 Å⁻¹
current_alpha	0.0000
highest_alpha	112000000.0000
n_real_points	36
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.822; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.842; Smooth: 0.773

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4. Crystallography & Experiment

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5. Entities & Polymer Info (1)

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6. Citations (1)

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7. Files & Curves (10)