131d
THE LOW-TEMPERATURE CRYSTAL STRUCTURE OF THE PURE-SPERMINE FORM OF Z-DNA REVEALS BINDING OF A SPERMINE MOLECULE IN THE MINOR GROOVE
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 131d |
| deposition_date | 1993-06-18 |
| title | THE LOW-TEMPERATURE CRYSTAL STRUCTURE OF THE PURE-SPERMINE FORM OF Z-DNA REVEALS BINDING OF A SPERMINE MOLECULE IN THE MINOR GROOVE |
| keywords | Z-DNA, DOUBLE HELIX, DNA; DNA |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 9.48 Å |
| rg_electron | 8.73 Å |
| i0 | 808846.00 |
| molecular_weight | 4045.0 kDa |
| excluded_volume | 4177 ų |
| envelope_volume | 4862 ų |
| shell_volume | 5187 ų |
| envelope_diameter | 31.6 Å |
| shell_rg | 13.31 Å |
| envelope_rg | 9.12 Å |
| shape_rg | 8.68 Å |
| total_rg | 9.87 Å |
| total_atoms | 270 |
| n_residues | 12 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 32.7 Å |
| rg_real | 9.44 Å |
| rg_real_error | 0.28 Å |
| i0_real | 8.0880e+05 |
| i0_real_error | 7.8370e+03 |
| rg_reciprocal | 9.44 Å |
| i0_reciprocal | 808800.0000 |
| total_estimate | 0.8618 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 12.0 Å |
| skewness | 0.257 |
| kurtosis | -0.184 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 68180.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.771; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.984; Smooth: 0.902 |