153d
CRYSTAL STRUCTURE OF A MISPAIRED DODECAMER, D(CGAGAATTC(O6ME)GCG)2, CONTAINING A CARCINOGENIC O6-METHYLGUANINE
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 153d |
| deposition_date | 1993-12-16 |
| title | CRYSTAL STRUCTURE OF A MISPAIRED DODECAMER, D(CGAGAATTC(O6ME)GCG)2, CONTAINING A CARCINOGENIC O6-METHYLGUANINE |
| keywords | B-DNA, DOUBLE HELIX, MODIFIED, MISMATCHED, DNA; DNA |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 13.47 Å |
| rg_electron | 12.96 Å |
| i0 | 2819440.00 |
| molecular_weight | 7389.0 kDa |
| excluded_volume | 7148 ų |
| envelope_volume | 9590 ų |
| shell_volume | 7110 ų |
| envelope_diameter | 45.4 Å |
| shell_rg | 16.99 Å |
| envelope_rg | 13.10 Å |
| shape_rg | 12.85 Å |
| total_rg | 13.71 Å |
| total_atoms | 492 |
| n_residues | 22 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 46.2 Å |
| rg_real | 13.53 Å |
| rg_real_error | 0.35 Å |
| i0_real | 2.8190e+06 |
| i0_real_error | 3.4610e+04 |
| rg_reciprocal | 13.53 Å |
| i0_reciprocal | 2819000.0000 |
| total_estimate | 0.7188 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 2 |
| r_peak_primary | 14.0 Å |
| skewness | 0.430 |
| kurtosis | -0.328 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 220800.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.810; Stabil: 1.000; Sysdev: 0.368; Positv: 1.000; Valcen: 0.827; Smooth: 0.980 |