169d
;THE SOLUTION STRUCTURE OF THE R(GCG)D(TATACCC):D(GGGTATACGC) OKAZAKI FRAGMENT CONTAINS TWO DISTINCT DUPLEX MORPHOLOGIES CONNECTED BY A JUNCTION ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 169d |
| deposition_date | 1994-04-11 |
| title | ;THE SOLUTION STRUCTURE OF THE R(GCG)D(TATACCC):D(GGGTATACGC) OKAZAKI FRAGMENT CONTAINS TWO DISTINCT DUPLEX MORPHOLOGIES CONNECTED BY A JUNCTION ; |
| keywords | DOUBLE HELIX, DNA/RNA HYBRID, DNA-RNA HYBRID complex, DNA-RNA HYBRID; DNA-RNA HYBRID |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 12.18 Å |
| rg_electron | 11.35 Å |
| i0 | 2031230.00 |
| molecular_weight | 6120.0 kDa |
| excluded_volume | 5923 ų |
| envelope_volume | 8001 ų |
| shell_volume | 6554 ų |
| envelope_diameter | 38.2 Å |
| shell_rg | 15.74 Å |
| envelope_rg | 11.39 Å |
| shape_rg | 11.17 Å |
| total_rg | 12.38 Å |
| total_atoms | 635 |
| n_residues | 20 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 39.9 Å |
| rg_real | 12.13 Å |
| rg_real_error | 0.35 Å |
| i0_real | 2.0310e+06 |
| i0_real_error | 2.6480e+04 |
| rg_reciprocal | 12.13 Å |
| i0_reciprocal | 2031000.0000 |
| total_estimate | 0.6417 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 3 |
| r_peak_primary | 16.7 Å |
| skewness | 0.161 |
| kurtosis | -0.377 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 75710.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.860; Stabil: 0.998; Sysdev: 0.256; Positv: 1.000; Valcen: 0.992; Smooth: 0.000 |